apTreeshape:: statistical analysis of phylogenetic tree shape

被引：96

作者：

Bortolussi, N ^{[1
]}

Durand, E ^{[1
]}

Blum, M ^{[1
]}

François, O ^{[1
]}

机构：

[1] Fac Med, TIMC, TIMB, F-38706 La Tronche, France

来源：

BIOINFORMATICS | 2006年 / 22卷 / 03期

关键词：

D O I：

10.1093/bioinformatics/bti798

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

apTreeshape is a R package dedicated to simulation and analysis of phylogenetic tree topologies using statistical imbalance measures. It is a companion library of the R package 'ape', which provides additional functions for reading, plotting, manipulating phylogenetic trees and for connecting to public phylogenetic tree databases. One strength of the package is to include appropriate corrections of classical shape statistics as well as new tests based on the statistical theory of likelihood ratios.

引用

页码：363 / 364

页数：2

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