Finding families for genomic ORFans

被引:187
作者
Fischer, D [1 ]
Eisenberg, D
机构
[1] Ben Gurion Univ Negev, Dept Math & Comp Sci, Fac Nat Sci, IL-84015 Beer Sheva, Israel
[2] Univ Calif Los Angeles, Inst Mol Biol, UCLA DOE Lab Struct Biol & Mol Med, Los Angeles, CA 90095 USA
关键词
D O I
10.1093/bioinformatics/15.9.759
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:759 / 762
页数:4
相关论文
共 13 条
  • [1] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    Altschul, SF
    Madden, TL
    Schaffer, AA
    Zhang, JH
    Zhang, Z
    Miller, W
    Lipman, DJ
    [J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (17) : 3389 - 3402
  • [2] BASIC LOCAL ALIGNMENT SEARCH TOOL
    ALTSCHUL, SF
    GISH, W
    MILLER, W
    MYERS, EW
    LIPMAN, DJ
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) : 403 - 410
  • [3] A METHOD TO IDENTIFY PROTEIN SEQUENCES THAT FOLD INTO A KNOWN 3-DIMENSIONAL STRUCTURE
    BOWIE, JU
    LUTHY, R
    EISENBERG, D
    [J]. SCIENCE, 1991, 253 (5016) : 164 - 170
  • [4] STRUCTURE-DERIVED HYDROPHOBIC POTENTIAL - HYDROPHOBIC POTENTIAL DERIVED FROM X-RAY STRUCTURES OF GLOBULAR-PROTEINS IS ABLE TO IDENTIFY NATIVE FOLDS
    CASARI, G
    SIPPL, MJ
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1992, 224 (03) : 725 - 732
  • [5] PROTEINS - 1000 FAMILIES FOR THE MOLECULAR BIOLOGIST
    CHOTHIA, C
    [J]. NATURE, 1992, 357 (6379) : 543 - 544
  • [6] COMPLETE DNA-SEQUENCE OF YEAST CHROMOSOME-XI
    DUJON, B
    ALEXANDRAKI, D
    ANDRE, B
    ANSORGE, W
    BALADRON, V
    BALLESTA, JPG
    BANREVI, A
    BOLLE, PA
    BOLOTINFUKUHARA, M
    BOSSIER, P
    BOU, G
    BOYER, J
    BUITRAGO, MJ
    CHERET, G
    COLLEAUX, L
    DALGNANFORNIER, B
    DELREY, F
    DION, C
    DOMDEY, H
    DUSTERHOFT, A
    DUSTERHUS, S
    ENTLAN, KD
    ERFLE, H
    ESTEBAN, PF
    FELDMANN, H
    FERNANDES, L
    FOBO, GM
    FRITZ, C
    FUKUHARA, H
    GABEL, C
    GAILLON, L
    CARCIACANTALEJO, JM
    GARCIARAMIREZ, JJ
    GENT, ME
    GHAZVINI, M
    GOFFEAU, A
    GONZALEZ, A
    GROTHUES, D
    GUERREIRO, P
    HEGEMANN, J
    HEWITT, N
    HILGER, F
    HOLLENBERG, CP
    HORAITIS, O
    INDGE, KJ
    JACQUIER, A
    JAMES, CM
    JAUNIAUX, JC
    JIMENEZ, A
    KEUCHEL, H
    [J]. NATURE, 1994, 369 (6479) : 371 - 378
  • [7] Assigning folds to the proteins encoded by the genome of Mycoplasma genitalium
    Fischer, D
    Eisenberg, D
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (22) : 11929 - 11934
  • [8] Life with 6000 genes
    Goffeau, A
    Barrell, BG
    Bussey, H
    Davis, RW
    Dujon, B
    Feldmann, H
    Galibert, F
    Hoheisel, JD
    Jacq, C
    Johnston, M
    Louis, EJ
    Mewes, HW
    Murakami, Y
    Philippsen, P
    Tettelin, H
    Oliver, SG
    [J]. SCIENCE, 1996, 274 (5287) : 546 - &
  • [9] PROFILE ANALYSIS - DETECTION OF DISTANTLY RELATED PROTEINS
    GRIBSKOV, M
    MCLACHLAN, AD
    EISENBERG, D
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1987, 84 (13) : 4355 - 4358
  • [10] A NEW APPROACH TO PROTEIN FOLD RECOGNITION
    JONES, DT
    TAYLOR, WR
    THORNTON, JM
    [J]. NATURE, 1992, 358 (6381) : 86 - 89