The solution structure of the C-terminal modular pair from Clostridium perfringens μ-toxin reveals a noncellulosomal dockerin module

被引:13
作者
Chitayat, Seth [1 ]
Adams, Jarrett J. [1 ]
Furness, Heather S. T. [1 ]
Bayer, Edward A. [2 ]
Smith, Steven P. [1 ,3 ]
机构
[1] Queens Univ, Dept Biochem, Kingston, ON K7L 3N6, Canada
[2] Weizmann Inst Sci, Dept Biol Chem, IL-76100 Rehovot, Israel
[3] Queens Univ, Prot Funct Discovery Grp, Kingston, ON K7L 3N6, Canada
基金
以色列科学基金会; 加拿大健康研究院;
关键词
Clostridium perfringens; toxin; dockerin; Ca2+-binding protein; glycoside hydrolase;
D O I
10.1016/j.jmb.2008.06.050
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The genome of the opportunistic pathogen Clostridium perfringens encodes a large number of secreted glycoside hydrolases. Their predicted activities indicate that they are involved in the breakdown of complex carbohydrates and other glycans found in the mucosal layer of the human gastrointestinal tract, within the extracellular matrix, and on the surface of host cells. One such group of these enzymes is the family 84 glycoside hydrolases, which has predicted hyaluronidase activity and comprises five members [C. perfringens glycoside hydrolase family 84 (CpGH84) A-E]. The first identified member, CpGH84A, corresponds to the mu-toxin whose modular architecture includes an N-terminal catalytic domain, four family 32 carbohydrate-binding modules, three FIVAR modules of unknown function, and a C-terminal putative calcium-binding module. Here, we report the solution NMR structure of the C-terminal modular pair from the mu-toxin. The three-helix bundle FIVAR module displays structural homology to a heparin-binding module within the N-terminal of the a C protein from group B Streptoccocus. The C-terminal module has a typical calcium-binding dockerin fold comprising two anti-parallel helices that form a planar face with EF-hand calcium-binding loops at opposite ends of the module. The size of the helical face of the mu-toxin dockerin module is approximately equal to the planar region recently identified on the surface of a cohesin-like X82 module of CpGH84C. Size-exclusion chromatography and heteronuclear NMR-based chemical shift mapping studies indicate that the helical face of the dockerin module recognizes the CpGH84C X82 module. These studies represent the structural characterization of a noncellulolytic dockerin module and its interaction with a cohesin-like X82 module. Dockerin/X82-mediated enzyme complexes may have important implications in the pathogenic properties of C. perfringens. (c) 2008 Elsevier Ltd. All rights reserved.
引用
收藏
页码:1202 / 1212
页数:11
相关论文
共 44 条
[1]   Mechanism of bacterial cell-surface attachment revealed by the structure of cellulosomal type II cohesin-dockerin complex [J].
Adams, JJ ;
Pal, G ;
Jia, ZC ;
Smith, SP .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (02) :305-310
[2]   Structural characterization of type II dockerin module from the cellulosome of Clostridium thermocellum:: Calcium-induced effects on conformation and target recognition [J].
Adams, JJ ;
Webb, BA ;
Spencer, HL ;
Smith, SP .
BIOCHEMISTRY, 2005, 44 (06) :2173-2182
[3]   Crystal structure of the n-terminal domain of the group B Streptococcus alpha C protein [J].
Aupérin, TC ;
Bolduc, GR ;
Baron, MJ ;
Heroux, A ;
Filman, DJ ;
Madoff, LC ;
Hogle, JM .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (18) :18245-18252
[4]  
BAKER EM, 1956, P SOC EXP BIOL MED, V91, P24
[5]   The cellulosomes: Multienzyme machines for degradation of plant cell wall polysaccharides [J].
Bayer, EA ;
Belaich, JP ;
Shoham, Y ;
Lamed, R .
ANNUAL REVIEW OF MICROBIOLOGY, 2004, 58 :521-554
[6]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[7]   MOLECULAR-GENETIC ANALYSIS OF THE NAGH GENE ENCODING A HYALURONIDASE OF CLOSTRIDIUM-PERFRINGENS [J].
CANARD, B ;
GARNIER, T ;
SAINTJOANIS, B ;
COLE, ST .
MOLECULAR AND GENERAL GENETICS, 1994, 243 (02) :215-224
[8]   Cellulosome assembly revealed by the crystal structure of the cohesin-dockerin complex [J].
Carvalho, AL ;
Dias, FMV ;
Prates, JAM ;
Nagy, T ;
Gilbert, HJ ;
Davies, GJ ;
Ferreira, LMA ;
Romao, MJ ;
Fontes, CMGA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (24) :13809-13814
[9]   Evidence for a dual binding mode of dockerin modules to cohesins [J].
Carvalho, Ana Luisa ;
Dias, Fernando M. V. ;
Nagy, Tibor ;
Prates, Jose A. M. ;
Proctor, Mark R. ;
Smith, Nicola ;
Bayer, Edward A. ;
Davies, Gideon J. ;
Ferreira, Luis M. A. ;
Romao, Maria J. ;
Fontes, Carlos M. G. A. ;
Gilbert, Harry J. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (09) :3089-3094
[10]   NMR assignment of backbone and side chain resonances for a dockerin-containing C-terminal fragment of the putative μ-toxin from Clostridium perfringens [J].
Chitayat, Seth ;
Adams, Jarrett J. ;
Smith, Steven P. .
BIOMOLECULAR NMR ASSIGNMENTS, 2007, 1 (01) :13-15