Data curation process curationdata integration science

被引:33
作者
Goble, Carole [1 ]
Stevens, Robert
Hull, Duncan [2 ]
Wolstencroft, Katy [1 ]
Lopez, Rodrigo [3 ]
机构
[1] Univ Manchester, Sch Comp Sci, Manchester M13 9PL, Lancs, England
[2] Univ Manchester, Sch Chem, Manchester M13 9PL, Lancs, England
[3] EBI, External Serv Grp, Hinxton, Cambs, England
基金
英国生物技术与生命科学研究理事会; 英国工程与自然科学研究理事会;
关键词
D O I
10.1093/bib/bbn034
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
In bioinformatics, we are familiar with the idea of curated data as a prerequisite for data integration. We neglect, often to our cost, the curation and cataloguing of the processes that we use to integrate and analyse our data. Programmatic access to services, for data and processes, means that compositions of services can be made that represent the in silico experiments or processes that bioinformaticians perform. Data integration through workflows depends on being able to know what services exist and where to find those services. The large number of services and the operations they perform, their arbitrary naming and lack of documentation, however, mean that they can be difficult to use. The workflows themselves are composite processes that could be pooled and reused but only if they too can be found and understood. Thus appropriate curation, including semantic mark-up, would enable processes to be found, maintained and consequently used more easily. This broader view on semantic annotation is vital for full data integration that is necessary for the modern scientific analyses in biology. This article will brief the community on the current state of the art and the current challenges for process curation, both within and without the Life Sciences.
引用
收藏
页码:506 / 517
页数:12
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