Functional advantages of dynamic protein disorder

被引:143
作者
Berlow, Rebecca B.
Dyson, H. Jane
Wright, Peter E. [1 ]
机构
[1] Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA
基金
美国国家卫生研究院;
关键词
Coupled folding and binding; Post-translational modification; Transcriptional activation; P53 TRANSACTIVATION DOMAIN; INTRINSICALLY UNSTRUCTURED PROTEINS; SMALL-MOLECULE INHIBITORS; ANTI-SIGMA FACTOR; C-TERMINAL HALF; STRUCTURAL BASIS; KIX DOMAIN; BINDING MECHANISMS; LINEAR MOTIFS; INDUCED FIT;
D O I
10.1016/j.febslet.2015.06.003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
070307 [化学生物学]; 071010 [生物化学与分子生物学];
摘要
Intrinsically disordered proteins participate in many important cellular regulatory processes. The absence of a well-defined structure in the free state of a disordered domain, and even on occasion when it is bound to physiological partners, is fundamental to its function. Disordered domains are frequently the location of multiple sites for post-translational modification, the key element of metabolic control in the cell. When a disordered domain folds upon binding to a partner, the resulting complex buries a far greater surface area than in an interaction of comparably-sized folded proteins, thus maximizing specificity at modest protein size. Disorder also maintains accessibility of sites for post-translational modification. Because of their inherent plasticity, disordered domains frequently adopt entirely different structures when bound to different partners, increasing the repertoire of available interactions without the necessity for expression of many different proteins. This feature also adds to the faithfulness of cellular regulation, as the availability of a given disordered domain depends on competition between various partners relevant to different cellular processes. (C) 2015 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:2433 / 2440
页数:8
相关论文
共 113 条
[1]
Folding of an intrinsically disordered protein by phosphorylation as a regulatory switch [J].
Bah, Alaji ;
Vernon, Robert M. ;
Siddiqui, Zeba ;
Krzeminski, Mickael ;
Muhandiram, Ranjith ;
Zhao, Charlie ;
Sonenberg, Nahum ;
Kay, Lewis E. ;
Forman-Kay, Julie D. .
NATURE, 2015, 519 (7541) :106-U240
[2]
MultiBac: expanding the research toolbox for multiprotein complexes [J].
Bieniossek, Christoph ;
Imasaki, Tsuyoshi ;
Takagi, Yuichiro ;
Berger, Imre .
TRENDS IN BIOCHEMICAL SCIENCES, 2012, 37 (02) :49-57
[3]
Bacterial in-cell NMR of human α-synuclein: a disordered monomer by nature? [J].
Binolfi, Andres ;
Theillet, Francois-Xavier ;
Selenko, Philipp .
BIOCHEMICAL SOCIETY TRANSACTIONS, 2012, 40 :950-U292
[4]
Single-stranded DNA mimicry in the p53 transactivation domain interaction with replication protein A [J].
Bochkareva, E ;
Kaustov, L ;
Ayed, A ;
Yi, GS ;
Lu, Y ;
Pineda-Lucena, A ;
Liao, JCC ;
Okorokov, AL ;
Milner, J ;
Arrowsmith, CH ;
Bochkarev, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (43) :15412-15417
[5]
Disorder and residual helicity alter p53-Mdm2 binding affinity and signaling in cells [J].
Borcherds, Wade ;
Theillet, Francois-Xavier ;
Katzer, Andrea ;
Finzel, Ana ;
Mishall, Katie M. ;
Powell, Anne T. ;
Wu, Hongwei ;
Manieri, Wanda ;
Dieterich, Christoph ;
Selenko, Philipp ;
Loewer, Alexander ;
Daughdrill, Gary W. .
NATURE CHEMICAL BIOLOGY, 2014, 10 (12) :1000-+
[6]
ADENOVIRUS-E1A, SIMIAN VIRUS-40 TUMOR-ANTIGEN, AND HUMAN PAPILLOMAVIRUS-E7 PROTEIN SHARE THE CAPACITY TO DISRUPT THE INTERACTION BETWEEN TRANSCRIPTION FACTOR-E2F AND THE RETINOBLASTOMA GENE-PRODUCT [J].
CHELLAPPAN, S ;
KRAUS, VB ;
KROGER, B ;
MUNGER, K ;
HOWLEY, PM ;
PHELPS, WC ;
NEVINS, JR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (10) :4549-4553
[7]
Chen L., 2015, P NATL ACAD SCI US
[8]
PHOSPHORYLATED CREB BINDS SPECIFICALLY TO THE NUCLEAR-PROTEIN CBP [J].
CHRIVIA, JC ;
KWOK, RPS ;
LAMB, N ;
HAGIWARA, M ;
MONTMINY, MR ;
GOODMAN, RH .
NATURE, 1993, 365 (6449) :855-859
[9]
Structural basis for Hif-1α/CBP recognition in the cellular hypoxic response [J].
Dames, SA ;
Martinez-Yamout, M ;
De Guzman, RN ;
Dyson, HJ ;
Wright, PE .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (08) :5271-5276
[10]
Conformations of intrinsically disordered proteins are influenced by linear sequence distributions of oppositely charged residues [J].
Das, Rahul K. ;
Pappu, Rohit V. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (33) :13392-13397