LARP1 specifically recognizes the 3′ terminus of poly(A) mRNA

被引:83
作者
Aoki, Kazuma [1 ]
Adachi, Shungo [1 ]
Homoto, Masae [1 ]
Kusano, Hideo [1 ]
Koike, Katsuyuki [1 ]
Natsume, Tohru [1 ]
机构
[1] Natl Inst Adv Ind Sci & Technol, Mol Profiling Res Ctr Drug Discovery molprof, Koutou, Tokyo 1350064, Japan
关键词
RNA-directed immunoprecipitation; Proteomics; LAPP1; Poly(A) tail; 5 ' TOP mRNA; P-BODIES; LA-MOTIF; PROTEIN; TRANSLATION; ORTHOLOGUE; DROSOPHILA; BINDING;
D O I
10.1016/j.febslet.2013.05.035
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A poly(A) tail functions in mRNA turnover and in facilitating translation as a ribonucleoprotein complex with poly(A) binding proteins (PABPs). However, factors that associate with the poly(A) tail other than PABPs have not been described. Using proteomics, we identified candidate proteins that interact to the 3' terminus of the poly(A) tail. Among these proteins, we focused on La motif-related protein 1 (LARP1) and found that LARP1 specifically recognizes the 3' termini of normal poly(A) tails. We also reveal that LARP1 stabilizes multiple mRNAs carrying 5' terminal oligopyrimidine tract (5'TOP). Our findings suggest that LARP1 may be involved in the post-transcriptional regulation of gene expression, at least in several 5'TOP mRNAs, through the binding to 3' terminus of the poly(A) tail. (C) 2013 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:2173 / 2178
页数:6
相关论文
共 26 条
[1]   Conserved and divergent features of the structure and function of La and La-related proteins (LARPs) [J].
Bayfield, Mark A. ;
Yang, Ruiqing ;
Maraia, Richard J. .
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS, 2010, 1799 (5-6) :365-378
[2]   Methylphosphate cap structure in small RNAs reduces the affinity of RNAs to La protein [J].
Bhattacharya, R ;
Perumal, K ;
Sinha, K ;
Maraia, R ;
Reddy, R .
GENE EXPRESSION, 2002, 10 (5-6) :243-253
[3]   Drosophila Larp associates with poly(A)-binding protein and is required for male fertility and syncytial embryo development [J].
Blagden, Sarah P. ;
Gatt, Melanie K. ;
Archambault, Vincent ;
Lada, Karolina ;
Ichihara, Keiko ;
Lilley, Kathryn S. ;
Inoue, Yoshihiro H. ;
Glover, David M. .
DEVELOPMENTAL BIOLOGY, 2009, 334 (01) :186-197
[4]   A comprehensive analysis of the La-motif protein superfamily [J].
Bousquet-Antonelli, Cecile ;
Deragon, Jean-Marc .
RNA, 2009, 15 (05) :750-764
[5]   The RNA binding protein Larp1 regulates cell division, apoptosis and cell migration [J].
Burrows, Carla ;
Latip, Normala Abd ;
Lam, Sarah-Jane ;
Carpenter, Lee ;
Sawicka, Kirsty ;
Tzolovsky, George ;
Gabra, Hani ;
Bushell, Martin ;
Glover, David M. ;
Willis, Anne E. ;
Blagden, Sarah P. .
NUCLEIC ACIDS RESEARCH, 2010, 38 (16) :5542-5553
[6]  
Chauvet S, 2000, DEV DYNAM, V218, P401, DOI 10.1002/1097-0177(200007)218:3<401::AID-DVDY1009>3.0.CO
[7]  
2-6
[8]   Formation of the 3′ end of histone mRNA:: Getting closer to the end [J].
Dominski, Zbigniew ;
Marzluff, William F. .
GENE, 2007, 396 (02) :373-390
[9]   Structure of the La motif: a winged helix domain mediates RNA binding via a conserved aromatic patch [J].
Dong, G ;
Chakshusmathi, G ;
Wolin, SL ;
Reinisch, KM .
EMBO JOURNAL, 2004, 23 (05) :1000-1007
[10]   5′ processing of tRNA precursors can be modulated by the human La antigen phosphoprotein [J].
Fan, H ;
Goodier, JL ;
Chamberlain, JR ;
Engelke, DR ;
Maraia, RJ .
MOLECULAR AND CELLULAR BIOLOGY, 1998, 18 (06) :3201-3211