Syntrophic Oxidation of Propionate in Rice Field Soil at 15 and 30°C under Methanogenic Conditions

被引:76
作者
Gan, Yanlu [1 ]
Qiu, Qiongfen [1 ,2 ]
Liu, Pengfei [1 ]
Rui, Junpeng [1 ]
Lu, Yahai [1 ]
机构
[1] China Agr Univ, Coll Resources & Environm Sci, Beijing 100094, Peoples R China
[2] Ningbo Univ, Fac Life Sci & Biotechnol, Ningbo 315211, Zhejiang, Peoples R China
关键词
PLANT RESIDUE DECOMPOSITION; ARCHAEAL COMMUNITY; PELOTOMACULUM-THERMOPROPIONICUM; SMITHELLA-PROPIONICA; ANAEROBIC-BACTERIA; METHANE EMISSION; RIBOSOMAL-RNA; GEN; NOV; SP; PADDY;
D O I
10.1128/AEM.00688-12
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Propionate is one of the major intermediary products in the anaerobic decomposition of organic matter in wetlands and paddy fields. Under methanogenic conditions, propionate is decomposed through syntrophic interaction between proton-reducing and propionate-oxidizing bacteria and H-2-consuming methanogens. Temperature is an important environmental regulator; yet its effect on syntrophic propionate oxidation has been poorly understood. In the present study, we investigated the syntrophic oxidation of propionate in a rice field soil at 15 degrees C and 30 degrees C. [U-C-13]propionate (99 atom%) was applied to anoxic soil slurries, and the bacteria and archaea assimilating C-13 were traced by DNA-based stable isotope probing. Syntrophobacter spp., Pelotomaculum spp., and Smithella spp. were found significantly incorporating C-13 into their nucleic acids after [C-13]propionate incubation at 30 degrees C. The activity of Smithella spp. increased in the later stage, and concurrently that of Syntrophomonas spp. increased. Aceticlastic Methanosaetaceae and hydrogenotrophic Methanomicrobiales and Methanocellales acted as methanogenic partners at 30 degrees C. Syntrophic oxidation of propionate also occurred actively at 15 degrees C. Syntrophobacter spp. were significantly labeled with C-13, whereas Pelotomaculum spp. were less active at this temperature. In addition, Methanomicrobiales, Methanocellales, and Methanosarcinaceae dominated the methanogenic community, while Methanosaetaceae decreased. Collectively, temperature markedly influenced the activity and community structure of syntrophic guilds degrading propionate in the rice field soil. Interestingly, Geobacter spp. and some other anaerobic organisms like Rhodocyclaceae, Acidobacteria, Actinobacteria, and Thermo-microbia probably also assimilated propionate-derived C-13. The mechanisms for the involvement of these organisms remain unclear.
引用
收藏
页码:4923 / 4932
页数:10
相关论文
共 46 条
[1]  
Chin KJ, 1999, APPL ENVIRON MICROB, V65, P2341
[2]   Geobacter hydrogenophilus, Geobacter chapellei and Geobacter grbiciae, three new, strictly anaerobic, dissimilatory Fe(III)-reducers [J].
Coates, JD ;
Bhupathiraju, VK ;
Achenbach, LA ;
McInerney, MJ ;
Lovley, DR .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :581-588
[3]   Functional and structural response of the methanogenic microbial community in rice field soil to temperature change [J].
Conrad, Ralf ;
Klose, Melanie ;
Noll, Matthias .
ENVIRONMENTAL MICROBIOLOGY, 2009, 11 (07) :1844-1853
[4]   Pathway of propionate oxidation by a syntrophic culture of Smithella propionica and Methanospirillum hungatei [J].
de Bok, FAM ;
Stams, AJM ;
Dijkema, C ;
Boone, DR .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2001, 67 (04) :1800-1804
[5]   Intermediary ecosystem metabolism as a main driver of methanogenesis in acidic wetland soil [J].
Drake, Harold L. ;
Horn, Marcus A. ;
Wuest, Pia K. .
ENVIRONMENTAL MICROBIOLOGY REPORTS, 2009, 1 (05) :307-318
[6]   Temporal change of 13C-isotope signatures and methanogenic pathways in rice field soil incubated anoxically at different temperatures [J].
Fey, A ;
Claus, P ;
Conrad, R .
GEOCHIMICA ET COSMOCHIMICA ACTA, 2004, 68 (02) :293-306
[7]   Thermophilic methanogens in rice field soil [J].
Fey, A ;
Chin, KJ ;
Conrad, R .
ENVIRONMENTAL MICROBIOLOGY, 2001, 3 (05) :295-303
[8]   Revising a process-based biogeochemistry model (DNDC) to simulate methane emission from rice paddy fields under various residue management and fertilizer regimes [J].
Fumoto, Tamon ;
Kobayashi, Kazuhiko ;
Li, Changsheng ;
Yagi, Kazuyuki ;
Hasegawa, Toshihiro .
GLOBAL CHANGE BIOLOGY, 2008, 14 (02) :382-402
[9]  
Glissmann K, 2000, FEMS MICROBIOL ECOL, V31, P117, DOI 10.1111/j.1574-6941.2000.tb00677.x
[10]   Syntrophobacter fumaroxidans sp. nov., a syntrophic propionate-degrading sulfate-reducing bacterium [J].
Harmsen, HJM ;
Van Kuijk, BLM ;
Plugge, CM ;
Akkermans, ADL ;
De Vos, WM ;
Stams, AJM .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1998, 48 :1383-1387