Group II introns as controllable gene targeting vectors for genetic manipulation of bacteria

被引:153
作者
Karberg, M
Guo, HT
Zhong, J
Coon, R
Perutka, J
Lambowitz, AM [1 ]
机构
[1] Univ Texas, Dept Chem & Biochem, Inst Mol & Cellular Biol, Austin, TX 78712 USA
[2] Univ Texas, Sch Biol Sci, Sect Mol Genet & Microbiol, Austin, TX 78712 USA
关键词
D O I
10.1038/nbt1201-1162
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Mobile group II introns can be retargeted to insert into virtually any desired DNA target. Here we show that retargeted group II introns can be used for highly specific chromosomal gene disruption in Escherichia coli and other bacteria at frequencies of 0.1-22%. Furthermore, the introns can be used to introduce targeted chromosomal breaks, which can be repaired by transformation with a homologous DNA fragment, enabling the introduction of point mutations. Because of their wide host range, mobile group II introns should be useful for genetic engineering and functional genomics in a wide variety of bacteria.
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页码:1162 / 1167
页数:6
相关论文
共 28 条
[1]  
[Anonymous], 1999, The RNA World
[2]   GENETIC SYSTEM FOR ANALYZING ESCHERICHIA-COLI THYMIDYLATE SYNTHASE [J].
BELFORT, M ;
PEDERSENLANE, J .
JOURNAL OF BACTERIOLOGY, 1984, 160 (01) :371-378
[3]  
BELFORT M, 2002, IN PRESS MOBILE DNA
[4]   Retrohoming of a bacterial group II intron: Mobility via complete reverse splicing, independent of homologous DNA recombination [J].
Cousineau, B ;
Smith, D ;
Lawrence-Cavanagh, S ;
Mueller, JE ;
Yang, J ;
Mills, D ;
Manias, D ;
Dunny, G ;
Lambowitz, AM ;
Belfort, M .
CELL, 1998, 94 (04) :451-462
[5]   Retrotransposition of a bacterial group II intron [J].
Cousineau, B ;
Lawrence, S ;
Smith, D ;
Belfort, M .
NATURE, 2000, 404 (6781) :1018-1021
[6]   One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products [J].
Datsenko, KA ;
Wanner, BL .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (12) :6640-6645
[7]   CLONING AND EXPRESSION OF THE GENE FOR BACTERIOPHAGE-T7 RNA-POLYMERASE [J].
DAVANLOO, P ;
ROSENBERG, AH ;
DUNN, JJ ;
STUDIER, FW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1984, 81 (07) :2035-2039
[8]   Analysis of gene targeting and intrachromosomal homologous recombination stimulated by genomic double-strand breaks in mouse embryonic stem cells [J].
Donoho, G ;
Jasin, M ;
Berg, P .
MOLECULAR AND CELLULAR BIOLOGY, 1998, 18 (07) :4070-4078
[9]   High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotides [J].
Ellis, HM ;
Yu, DG ;
DiTizio, T ;
Court, DL .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (12) :6742-6746
[10]   Multiple homing pathways used by yeast mitochondrial group II introns [J].
Eskes, R ;
Liu, L ;
Ma, HW ;
Chao, MY ;
Dickson, L ;
Lambowitz, AM ;
Perlman, PS .
MOLECULAR AND CELLULAR BIOLOGY, 2000, 20 (22) :8432-8446