Culturing a plant microbiome community at the cross-Rhodes

被引:46
作者
Lebeis, Sarah L. [1 ]
Rott, Matthias [2 ]
Dangl, Jeffery L. [1 ]
Schulze-Lefert, Paul [2 ]
机构
[1] Univ N Carolina, Dept Biol, Chapel Hill, NC 27599 USA
[2] Max Planck Inst Plant Breeding Res, Dept Plant Microbe Interact, D-50829 Cologne, Germany
基金
美国国家科学基金会;
关键词
metagenomics; microbial ecology; phyllosphere; plant microbiome; plant-microbe interactions; rhizosphere; RHIZOSPHERE MICROBIOME; SEQUENCE;
D O I
10.1111/j.1469-8137.2012.04336.x
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
引用
收藏
页码:341 / 344
页数:4
相关论文
共 16 条
[1]   Grinder: a versatile amplicon and shotgun sequence simulator [J].
Angly, Florent E. ;
Willner, Dana ;
Rohwer, Forest ;
Hugenholtz, Philip ;
Tyson, Gene W. .
NUCLEIC ACIDS RESEARCH, 2012, 40 (12)
[2]   Reference genome sequence of the model plant Setaria [J].
Bennetzen, Jeffrey L. ;
Schmutz, Jeremy ;
Wang, Hao ;
Percifield, Ryan ;
Hawkins, Jennifer ;
Pontaroli, Ana C. ;
Estep, Matt ;
Feng, Liang ;
Vaughn, Justin N. ;
Grimwood, Jane ;
Jenkins, Jerry ;
Barry, Kerrie ;
Lindquist, Erika ;
Hellsten, Uffe ;
Deshpande, Shweta ;
Wang, Xuewen ;
Wu, Xiaomei ;
Mitros, Therese ;
Triplett, Jimmy ;
Yang, Xiaohan ;
Ye, Chu-Yu ;
Mauro-Herrera, Margarita ;
Wang, Lin ;
Li, Pinghua ;
Sharma, Manoj ;
Sharma, Rita ;
Ronald, Pamela C. ;
Panaud, Olivier ;
Kellogg, Elizabeth A. ;
Brutnell, Thomas P. ;
Doust, Andrew N. ;
Tuskan, Gerald A. ;
Rokhsar, Daniel ;
Devos, Katrien M. .
NATURE BIOTECHNOLOGY, 2012, 30 (06) :555-+
[3]   The rhizosphere microbiome and plant health [J].
Berendsen, Roeland L. ;
Pieterse, Corne M. J. ;
Bakker, Peter A. H. M. .
TRENDS IN PLANT SCIENCE, 2012, 17 (08) :478-486
[4]   Directed Culturing of Microorganisms Using Metatranscriptomics [J].
Bomar, Lindsey ;
Maltz, Michele ;
Colston, Sophie ;
Graf, Joerg .
MBIO, 2011, 2 (02)
[5]   Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota [J].
Bulgarelli, Davide ;
Rott, Matthias ;
Schlaeppi, Klaus ;
van Themaat, Emiel Ver Loren ;
Ahmadinejad, Nahal ;
Assenza, Federica ;
Rauf, Philipp ;
Huettel, Bruno ;
Reinhardt, Richard ;
Schmelzer, Elmon ;
Peplies, Joerg ;
Gloeckner, Frank Oliver ;
Amann, Rudolf ;
Eickhorst, Thilo ;
Schulze-Lefert, Paul .
NATURE, 2012, 488 (7409) :91-95
[6]  
DAWKINS R, 1978, Z TIERPSYCHOL, V47, P61
[7]   Extensive personal human gut microbiota culture collections characterized and manipulated in gnotobiotic mice [J].
Goodman, Andrew L. ;
Kallstrom, George ;
Faith, Jeremiah J. ;
Reyes, Alejandro ;
Moore, Aimee ;
Dantas, Gautam ;
Gordon, Jeffrey I. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (15) :6252-6257
[8]   Properties of bacterial endophytes and their proposed role in plant growth [J].
Hardoim, Pablo R. ;
van Overbeek, Leo S. ;
van Elsas, Jan Dirk .
TRENDS IN MICROBIOLOGY, 2008, 16 (10) :463-471
[9]   Unlocking the potential of metagenomics through replicated experimental design [J].
Knight, Rob ;
Jansson, Janet ;
Field, Dawn ;
Fierer, Noah ;
Desai, Narayan ;
Fuhrman, Jed A. ;
Hugenholtz, Phil ;
van der Lelie, Daniel ;
Meyer, Folker ;
Stevens, Rick ;
Bailey, Mark J. ;
Gordon, Jeffrey I. ;
Kowalchuk, George A. ;
Gilbert, Jack A. .
NATURE BIOTECHNOLOGY, 2012, 30 (06) :513-520
[10]   Microbiology of the phyllosphere [J].
Lindow, SE ;
Brandl, MT .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2003, 69 (04) :1875-1883