Deoxyribonucleotide-containing RNAs: a novel class of templates for HIV-1 reverse transcriptase

被引:15
作者
Gudima, SO [1 ]
Kazantseva, EG [1 ]
Kostyuk, DA [1 ]
Shchaveleva, IL [1 ]
Grishchenko, OI [1 ]
Memelova, LV [1 ]
Kochetkov, SN [1 ]
机构
[1] VA ENGELHARDT MOL BIOL INST,MOSCOW 117984,RUSSIA
关键词
D O I
10.1093/nar/25.22.4614
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Deoxyribonucleotide-containing RNA-like polynucleotides (dcRNAs) were synthesized by mutant T7 RNA polymerase and their structures confirmed by sequencing. dcRNAs annealed with a 20mer oligodeoxyribonucleotide primer were tested as templates/primers in the reverse transcription reaction catalyzed by HIV-1 reverse transcriptase (RT). All dcRNAs were shown to be efficient templates for both wild-type RT and RT mutants, containing 'AZT-resistant' mutations. Differences in the patterns of the DNA products of RNA-and dcRNA-driven reverse transcription were demonstrated. The kinetic characteristics for dcRNAs utilization were compared with the corresponding parameters for RNA/DNA and DNA/DNA templates/primers. The respective K-m values for dcRNAs appear to be intermediate between those for RNA and DNA templates. A correlation equation connecting apparent K-m value for template/primer and the number of deoxyribonucleotide substitutions in RNA template is proposed.
引用
收藏
页码:4614 / 4618
页数:5
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