Structure of human ubiquitin-conjugating enzyme E2 G2 (UBE2G2/UBC7)

被引:20
作者
Arai, R
Yoshikawa, S
Murayama, K
Imai, Y
Takahashi, R
Shirouzu, M
Yokoyama, S [1 ]
机构
[1] RIKEN, Genom Sci Ctr, Prot Res Grp, Yokohama, Kanagawa 2300045, Japan
[2] RIKEN SPring8 Ctr, Harima Inst, Sayo, Hyogo 6795148, Japan
[3] Tohoku Univ, Biomed Engn Res Org, Aoba Ku, Sendai, Miyagi 9808575, Japan
[4] RIKEN Brain Sci Inst, Wako, Saitama 3510198, Japan
[5] Kyoto Univ, Grad Sch Med, Dept Neurol, Sakyo Ku, Kyoto 6068507, Japan
[6] Univ Tokyo, Grad Sch Sci, Dept Biophys & Biochem, Bunkyo Ku, Tokyo 1130033, Japan
来源
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS | 2006年 / 62卷
关键词
D O I
10.1107/S1744309106009006
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The human ubiquitin-conjugating enzyme E2 G2 (UBE2G2/UBC7) is involved in protein degradation, including a process known as endoplasmic reticulum-associated degradation (ERAD). The crystal structure of human UBE2G2/UBC7 was solved at 2.56 angstrom resolution. The UBE2G2 structure comprises a single domain consisting of an antiparallel beta-sheet with four strands, five alpha-helices and two 3(10)-helices. Structural comparison of human UBE2G2 with yeast Ubc7 indicated that the overall structures are similar except for the long loop region and the C-terminal helix. Superimposition of UBE2G2 on UbcH7 in a c-Cbl-UbcH7-ZAP70 ternary complex suggested that the two loop regions of UBE2G2 interact with the RING domain in a similar way to UbcH7. In addition, the extra loop region of UBE2G2 may interact with the RING domain or its neighbouring region and may be involved in the binding specificity and stability.
引用
收藏
页码:330 / 334
页数:5
相关论文
共 33 条
[1]  
Brunger AT, 1998, ACTA CRYSTALLOGR D, V54, P905, DOI 10.1107/s0907444998003254
[2]   Crystal structure of a class I ubiquitin conjugating enzyme (Ubc7) from Saccharomyces cerevisiae at 2.9 angstrom resolution [J].
Cook, WJ ;
Martin, PD ;
Edwards, BFP ;
Yamazaki, RK ;
Chau, V .
BIOCHEMISTRY, 1997, 36 (07) :1621-1627
[3]  
DELANO WL, 2005, PYMOL V0 98
[4]   The tumor autocrine motility factor receptor, gp78, is a ubiquitin protein ligase implicated in degradation from the endoplasmic reticulum [J].
Fang, SY ;
Ferrone, M ;
Yang, CH ;
Jensen, JP ;
Tiwari, S ;
Weissman, AM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (25) :14422-14427
[5]   ESPript:: analysis of multiple sequence alignments in PostScript [J].
Gouet, P ;
Courcelle, E ;
Stuart, DI ;
Métoz, F .
BIOINFORMATICS, 1999, 15 (04) :305-308
[6]   TEB4 is a C4HC3 RING finger-containing ubiquitin ligase of the endoplasmic reticulum [J].
Hassink, G ;
Kikkert, M ;
van Voorden, S ;
Lee, SJ ;
Spaapen, R ;
van Laar, T ;
Coleman, CS ;
Bartee, E ;
Früh, K ;
Chau, V ;
Wiertz, E .
BIOCHEMICAL JOURNAL, 2005, 388 (02) :647-655
[7]   The ubiquitin system [J].
Hershko, A ;
Ciechanover, A .
ANNUAL REVIEW OF BIOCHEMISTRY, 1998, 67 :425-479
[8]   Structure of an E6AP-UbcH7 complex: Insights into ubiquitination by the E2-E3 enzyme cascade [J].
Huang, L ;
Kinnucan, E ;
Wang, GL ;
Beaudenon, S ;
Howley, PM ;
Huibregtse, JM ;
Pavletich, NP .
SCIENCE, 1999, 286 (5443) :1321-1326
[9]   Parkin suppresses unfolded protein stress-induced cell death through its E3 ubiquitin-protein ligase activity [J].
Imai, Y ;
Soda, M ;
Takahashi, R .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (46) :35661-35664
[10]   An unfolded putative transmembrane polypeptide, which can lead to endoplasmic reticulum stress, is a substrate of parkin [J].
Imai, Y ;
Soda, M ;
Inoue, H ;
Hattori, N ;
Mizuno, Y ;
Takahashi, R .
CELL, 2001, 105 (07) :891-902