Genetics of the connectome

被引:114
作者
Thompson, Paul M. [1 ]
Ge, Tian [2 ,3 ]
Glahn, David C. [4 ,5 ]
Jahanshad, Neda [1 ]
Nichols, Thomas E. [6 ,7 ,8 ]
机构
[1] Univ Calif Los Angeles, Sch Med, Imaging Genet Ctr, Lab NeuroImaging,Dept Neurol, Los Angeles, CA 90095 USA
[2] Fudan Univ, Ctr Computat Syst Biol, Sch Math Sci, Shanghai 200433, Peoples R China
[3] Univ Warwick, Dept Comp Sci, Coventry CV4 7AL, W Midlands, England
[4] Inst Living, Olin Neuropsychiat Res Ctr, Hartford, CT 06106 USA
[5] Yale Univ, Sch Med, Dept Psychiat, New Haven, CT 06571 USA
[6] Univ Warwick, Dept Stat, Coventry CV4 7AL, W Midlands, England
[7] Univ Warwick, Warwick Mfg Grp, Coventry CV4 7AL, W Midlands, England
[8] Univ Oxford, John Radcliffe Hosp, Funct Magnet Resonance Imaging Brain FMRIB Ctr, Nuffield Dept Clin Neurosci, Oxford OX3 9DU, England
关键词
CATECHOL-O-METHYLTRANSFERASE; GENOME-WIDE ASSOCIATION; WHITE-MATTER MICROSTRUCTURE; GENERALIZED LINEAR-MODELS; QUANTITATIVE TRAIT LOCI; NEUROIMAGING PHENOTYPES; FUNCTIONAL ARCHITECTURE; BRAIN CONNECTIVITY; VARIABLE SELECTION; PSYCHOSIS VARIANT;
D O I
10.1016/j.neuroimage.2013.05.013
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Connectome genetics attempts to discover how genetic factors affect brain connectivity. Here we review a variety of genetic analysis methods such as genome-wide association studies (GWAS), linkage and candidate gene studies that have been fruitfully adapted to imaging data to implicate specific variants in the genome for brain-related traits. Studies that emphasized the genetic influences on brain connectivity. Some of these analyses of brain integrity and connectivity using diffusion MRI, and others have mapped genetic effects on functional networks using resting state functional MAL Connectome-wide genome-wide scans have also been conducted, and we review the multivariate methods required to handle the extremely high dimension of the genomic and network data. We also review some consortium efforts, such as ENIGMA, that offer the power to detect robust common genetic associations using phenotypic harmonization procedures and meta-analysis. Current work on connectome genetics is advancing on manyfronts and promises to shed light on how disease risk genes affect the brain. It is already discovering new genetic loci and even entire genetic networks that affect brain organization and connectivity. (C) 2013 Elsevier Inc. All rights reserved.
引用
收藏
页码:475 / 488
页数:14
相关论文
共 128 条
[1]  
[Anonymous], 2006, STAT PARAMETRIC MAPP
[2]   Neurobiology of Emotional Dysfunction in Schizophrenia: New Directions Revealed Through Meta-Analyses [J].
Anticevic, Alan ;
Van Snellenberg, Jared X. ;
Barch, Deanna M. .
BIOLOGICAL PSYCHIATRY, 2012, 71 (06) :E23-E24
[3]   Conserved and variable architecture of human white matter connectivity [J].
Bassett, Danielle S. ;
Brown, Jesse A. ;
Deshpande, Vibhas ;
Carlson, Jean M. ;
Grafton, Scott T. .
NEUROIMAGE, 2011, 54 (02) :1262-1279
[4]   CONTROLLING THE FALSE DISCOVERY RATE - A PRACTICAL AND POWERFUL APPROACH TO MULTIPLE TESTING [J].
BENJAMINI, Y ;
HOCHBERG, Y .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 1995, 57 (01) :289-300
[5]   Localization and identification of human quantitative trait loci: King Harvest has surely come [J].
Blangero, J .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2004, 14 (03) :233-240
[6]   Genetic and Environmental Influences on Neuroimaging Phenotypes: A Meta-Analytical Perspective on Twin Imaging Studies [J].
Blokland, Gabriella A. M. ;
de Zubicaray, Greig I. ;
McMahon, Katie L. ;
Wright, Margaret J. .
TWIN RESEARCH AND HUMAN GENETICS, 2012, 15 (03) :351-371
[7]   Relationship of a Variant in the NTRK1 Gene to White Matter Microstructure in Young Adults [J].
Braskie, Meredith N. ;
Jahanshad, Neda ;
Stein, Jason L. ;
Barysheva, Marina ;
Johnson, Kori ;
McMahon, Katie L. ;
de Zubicaray, Greig I. ;
Martin, Nicholas G. ;
Wright, Margaret J. ;
Ringman, John M. ;
Toga, Arthur W. ;
Thompson, Paul M. .
JOURNAL OF NEUROSCIENCE, 2012, 32 (17) :5964-5972
[8]   Common Alzheimer's Disease Risk Variant within the CLU Gene Affects White Matter Microstructure in Young Adults [J].
Braskie, Meredith N. ;
Jahanshad, Neda ;
Stein, Jason L. ;
Barysheva, Marina ;
McMahon, Katie L. ;
de Zubicaray, Greig I. ;
Martin, Nicholas G. ;
Wright, Margaret J. ;
Ringman, John M. ;
Toga, Arthur W. ;
Thompson, Paul M. .
JOURNAL OF NEUROSCIENCE, 2011, 31 (18) :6764-6770
[9]   Brain network local interconnectivity loss in aging APOE-4 allele carriers [J].
Brown, Jesse A. ;
Terashima, Kevin H. ;
Burggren, Alison C. ;
Ercoli, Linda M. ;
Miller, Karen J. ;
Small, Gary W. ;
Bookheimer, Susan Y. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (51) :20760-20765
[10]   Resting-State Network Disruption and APOE Genotype in Alzheimer's Disease: A lagged Functional Connectivity Study [J].
Canuet, Leonides ;
Tellado, Ivan ;
Couceiro, Veronica ;
Fraile, Carmen ;
Fernandez-Novoa, Lucia ;
Ishii, Ryouhei ;
Takeda, Masatoshi ;
Cacabelos, Ramon .
PLOS ONE, 2012, 7 (09)