Inter- and intraspecific variation of the Pseudo-nitzschia delicatissima complex (Bacillariophyceae) illustrated by rRNA probes, morphological data and phylogenetic analyses

被引:183
作者
Lundholm, N
Moestrup, O
Kotaki, Y
Hoef-Emden, K
Scholin, C
Miller, P
机构
[1] Univ Copenhagen, Inst Biol, Dept Phycol, DK-1353 Copenhagen K, Denmark
[2] Kitasato Univ, Sch Fisheries Sci, Sanriku, Iwate 0220101, Japan
[3] Univ Cologne, Inst Bot, D-50931 Cologne, Germany
[4] Monterey Bay Aquarium Res Inst, Moss Landing, CA 95039 USA
[5] Univ Calif Santa Cruz, Moss Landing, CA 95039 USA
关键词
Bacillariaceae; cryptic diversity; diatoms; intraspecific; ITS rDNA; morphology; P; decipiens; dolorosa; phylogeny; probes; taxonomy; Pseudo-nitzschia delicatissima;
D O I
10.1111/j.1529-8817.2006.00211.x
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
A study of 25 cultures tentatively identified as Pseudo-nitzschia delicatissima (Cleve) Heiden, and originating from geographically widely distributed locations, showed both morphological and genetic variation among strains. Use of rRNA-targeted DNA probes on 17 different strains showed large variation in the hybridization patterns. Detailed morphological studies placed the isolates into three groups. The sample on which the neotype of P. delicatissima is based was also examined, and used to establish the morphological identity of P. delicatissima. Phylogenetic analyses of 16 strains, based on sequences of internal transcriber spacer 1 (ITS1), 5.8S and ITS2 of the nuclear-encoded rDNA, supported the morphological observations and the hybridization studies, and revealed large genetic variation among strains. A combination of the morphological and molecular findings resulted in the description of two new species, P. decipiens sp. nov. and P. dolorosa sp. nov. P. dolorosa has a mixture of one or two rows of poroids in the striae whereas P. delicatissima always has two rows. In addition, P. dolorosa has wider valves and a lower density of poroids. P. decipiens differs from P. delicatissima by a higher density of striae on the valve face as well as a higher density of poroids on the girdle bands. Among the strains referred to P. delicatissima, an epitype was selected. Large genetic variation was found among the P. delicatissima strains and a subdivision into two major clades represent cryptic species.
引用
收藏
页码:464 / 481
页数:18
相关论文
共 64 条
[1]   Life cycle, size reduction patterns, and ultrastructure of the pennate planktonic diatom Pseudo-nitzschia delicatissima (Bacillariophyceae) [J].
Amato, A ;
Orsini, L ;
D'Alelio, D ;
Montresor, M .
JOURNAL OF PHYCOLOGY, 2005, 41 (03) :542-556
[2]   THE ITS REGION OF NUCLEAR RIBOSOMAL DNA - A VALUABLE SOURCE OF EVIDENCE ON ANGIOSPERM PHYLOGENY [J].
BALDWIN, BG ;
SANDERSON, MJ ;
PORTER, JM ;
WOJCIECHOWSKI, MF ;
CAMPBELL, CS ;
DONOGHUE, MJ .
ANNALS OF THE MISSOURI BOTANICAL GARDEN, 1995, 82 (02) :247-277
[3]   Detection of stable pre-rRNA in toxigenic Pseudo-nitzschia species [J].
Cangelosi, GA ;
Hamlin, AM ;
Marin, R ;
Scholin, CA .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1997, 63 (12) :4859-4865
[4]   The alternation of different morphotypes in the seasonal cycle of the toxic diatom Pseudo-nitzschia galaxiae [J].
Cerino, F ;
Orsini, L ;
Sarno, D ;
Dell'Aversano, C ;
Tartaglione, L ;
Zingone, A .
HARMFUL ALGAE, 2005, 4 (01) :33-48
[5]   Phylogenetic analysis of "Volvocacae" for comparative genetic studies [J].
Coleman, AW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (24) :13892-13897
[6]   Ribosomal DNA ITS-1 and ITS-2 sequence comparisons as a tool for predicting genetic relatedness [J].
Coleman, AW ;
Mai, JC .
JOURNAL OF MOLECULAR EVOLUTION, 1997, 45 (02) :168-177
[7]  
Douglas Donald J., 1994, Natural Toxins, V2, P166, DOI 10.1002/nt.2620020404
[8]  
Doyle J. L., 1987, Phytochemical Bulletin, V19, P11, DOI 10.2307/4119796
[9]   High levels of genetic diversity and low levels of genetic differentiation in North Sea Pseudo-nitzschia pungens (Bacillariophyceae) populations [J].
Evans, KM ;
Kühn, SF ;
Hayes, PK .
JOURNAL OF PHYCOLOGY, 2005, 41 (03) :506-514
[10]   Microsatellite marker development and genetic variation in the toxic marine diatom Pseudo-nitzschia multiseries (Bacillariophyceae) [J].
Evans, KM ;
Bates, SS ;
Medlin, LK ;
Hayes, PK .
JOURNAL OF PHYCOLOGY, 2004, 40 (05) :911-920