The Important Role of Lone-Pairs in Force Field (MM4) Calculations on Hydrogen Bonding in Alcohols

被引:14
作者
Lii, Jenn-Huei [1 ]
Allinger, Norman L. [1 ]
机构
[1] Univ Georgia, Dept Chem, Athens, GA 30602 USA
关键词
D O I
10.1021/jp804581h
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
An expanded treatment of hydrogen bonding has been developed for MM4 force field calculations, which is an extension from the traditional van der Waals-electrostatic model. It adds explicit hydrogen-bond angularity by the inclusion of lone-pair directionality. The vectors that account for this directionality are placed along the hydrogen acceptor and its chemically intuitive electron pairs. No physical lone-pairs are used in the calculations. Instead, an H-bond angularity function, and a lone-pair directionality function, are incorporated into the hydrogen-bond term. The inclusion of the lone-pair directionality results in improved accuracy in hydrogen-bonded geometries and interaction energies. In this work is described hydrogen bonding in alcohols, and also in water and hydrogen fluoride dimer. The extension to other compounds such as aldehydes, ketones, amides, and so oil is straightforward and will be discussed in future work. The conformational energies of ethylene glycol are discussed.
引用
收藏
页码:11903 / 11913
页数:11
相关论文
共 68 条
[1]   CONFORMATIONAL-ANALYSIS .130. MM2 - HYDROCARBON FORCE-FIELD UTILIZING V1 AND V2 TORSIONAL TERMS [J].
ALLINGER, NL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1977, 99 (25) :8127-8134
[2]   Alcohols, ethers, carbohydrates, and related compounds. I. The MM4 force field for simple compounds [J].
Allinger, NL ;
Chen, KH ;
Lii, JH ;
Durkin, KA .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 2003, 24 (12) :1447-1472
[3]   MOLECULAR MECHANICS - THE MM3 FORCE-FIELD FOR HYDROCARBONS .1. [J].
ALLINGER, NL ;
YUH, YH ;
LII, JH .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1989, 111 (23) :8551-8566
[4]  
Allinger NL, 1996, J COMPUT CHEM, V17, P642, DOI 10.1002/(SICI)1096-987X(199604)17:5/6<642::AID-JCC6>3.0.CO
[5]  
2-U
[6]   CONFORMATIONAL-ANALYSIS .118. APPLICATION OF MOLECULAR-MECHANICS METHOD TO ALCOHOLS AND ETHERS [J].
ALLINGER, NL ;
CHUNG, DY .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1976, 98 (22) :6798-6803
[7]   HYDROGEN-BONDING IN MM2 [J].
ALLINGER, NL ;
KOK, RA ;
IMAM, MR .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1988, 9 (06) :591-595
[8]   CALCULATION OF SMALL MOLECULAR INTERACTIONS BY DIFFERENCES OF SEPARATE TOTAL ENERGIES - SOME PROCEDURES WITH REDUCED ERRORS [J].
BOYS, SF ;
BERNARDI, F .
MOLECULAR PHYSICS, 1970, 19 (04) :553-&
[9]   GAS-PHASE ACIDITIES OF ALCOHOLS [J].
BRAUMAN, JI ;
BLAIR, LK .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1970, 92 (20) :5986-&
[10]   CHARMM - A PROGRAM FOR MACROMOLECULAR ENERGY, MINIMIZATION, AND DYNAMICS CALCULATIONS [J].
BROOKS, BR ;
BRUCCOLERI, RE ;
OLAFSON, BD ;
STATES, DJ ;
SWAMINATHAN, S ;
KARPLUS, M .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1983, 4 (02) :187-217