Stm1 Modulates mRNA Decay and Dhh1 Function in Saccharomyces cerevisiae

被引:27
作者
Balagopal, Vidya
Parker, Roy [1 ,2 ]
机构
[1] Univ Arizona, Dept Mol & Cellular Biol, Tucson, AZ 85721 USA
[2] Univ Arizona, Howard Hughes Med Inst, Tucson, AZ 85721 USA
基金
美国国家卫生研究院;
关键词
TRANSLATION INITIATION; P-BODIES; PROCESSING BODIES; BINDING PROTEIN; GENE DELETION; YEAST; DEADENYLATION; TRANSCRIPT; TURNOVER; MFA2;
D O I
10.1534/genetics.108.092601
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The control of mRNA degradation and translation are important for the regulation of gene expression. mRNA degradation is often initiated by deadenylation, which leads to decapping and 5'-3' decay. In the budding yeast Saccharomyces cerevisae, decapping is promoted by the Dhh1 and Pat1 proteins, which appear to both inhibit translation initiation and promote decapping. To understand the function of these factors, we identified the ribosome binding protein Sun I as a multicopy suppressor of the temperature sensitivity of the pat1 Delta strain. Stm1 loss-of-function alleles and overexpression strains show several genetic interactions with Pat1 and Dhh1 alleles in a manner consistent with Stm1 working Upstream of Dhh1 to promote Dhh1 function. Consistent with Stm1 affecting Dhh1 function, stm1 Delta strains are defective ill the degradation of the EDC1 and COX17mRNAs, whose decay is strongly affected by the loss of Dhh1. These results; identify Stm1 as an additional component of the mRNA degradation machinery and suggest a possible connection of mRNA decapping to ribosome function.
引用
收藏
页码:93 / 103
页数:11
相关论文
共 38 条
[1]   Glucose depletion rapidly inhibits translation initiation in yeast [J].
Ashe, MP ;
De Long, SK ;
Sachs, AB .
MOLECULAR BIOLOGY OF THE CELL, 2000, 11 (03) :833-848
[2]  
BEELMAN CA, 1994, J BIOL CHEM, V269, P9687
[3]   An essential component of the decapping enzyme required for normal rates of mRNA turnover [J].
Beelman, CA ;
Stevens, A ;
Caponigro, G ;
LaGrandeur, TE ;
Hatfield, L ;
Fortner, DM ;
Parker, R .
NATURE, 1996, 382 (6592) :642-646
[4]   P bodies promote stress granule assembly in Saccharomyces cerevisiae [J].
Buchan, J. Ross ;
Muhlrad, Denise ;
Parker, Roy .
JOURNAL OF CELL BIOLOGY, 2008, 183 (03) :441-455
[5]   A SMALL SEGMENT OF THE MAT-ALPHA-1 TRANSCRIPT PROMOTES MESSENGER-RNA DECAY IN SACCHAROMYCES-CEREVISIAE - A STIMULATORY ROLE FOR RARE CODONS [J].
CAPONIGRO, G ;
MUHLRAD, D ;
PARKER, R .
MOLECULAR AND CELLULAR BIOLOGY, 1993, 13 (09) :5141-5148
[6]   Crystal structure and functional analysis of DEAD-box protein Dhh1p [J].
Cheng, ZH ;
Coller, J ;
Parker, R ;
Song, H .
RNA, 2005, 11 (08) :1258-1270
[7]   Eukaryotic mRNA decapping [J].
Coller, J ;
Parker, R .
ANNUAL REVIEW OF BIOCHEMISTRY, 2004, 73 :861-890
[8]   General translational repression by activators of mRNA decapping [J].
Coller, J ;
Parker, R .
CELL, 2005, 122 (06) :875-886
[9]   The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes [J].
Coller, JM ;
Tucker, M ;
Sheth, U ;
Valencia-Sanchez, MA ;
Parker, R .
RNA, 2001, 7 (12) :1717-1727
[10]   A TURNOVER PATHWAY FOR BOTH STABLE AND UNSTABLE MESSENGER-RNAS IN YEAST - EVIDENCE FOR A REQUIREMENT FOR DEADENYLATION [J].
DECKER, CJ ;
PARKER, R .
GENES & DEVELOPMENT, 1993, 7 (08) :1632-1643