The effect of Gibbs ringing artifacts on measures derived from diffusion MRI

被引:91
作者
Perrone, Daniele [1 ]
Aelterman, Jan [1 ]
Pizurica, Aleksandra [1 ]
Jeurissen, Ben [2 ]
Philips, Wilfried [1 ]
Leemans, Alexander [3 ]
机构
[1] Univ Ghent, iMinds IPI, B-9000 Ghent, Belgium
[2] Univ Antwerp, Dept Phys, iMinds Vis Lab, Antwerp, Belgium
[3] Univ Med Ctr Utrecht, Image Sci Inst, Utrecht, Netherlands
关键词
Gibbs ringing artifact; Diffusion MRI; Diffusion tensor imaging; Diffusion kurtosis imaging; Data quality; Fractional anisotropy; Mean diffusivity; TRAUMATIC BRAIN-INJURY; INTRAVOXEL INCOHERENT MOTIONS; AMYOTROPHIC-LATERAL-SCLEROSIS; WHITE-MATTER ABNORMALITIES; EDDY-CURRENT ARTIFACTS; LINEAR LEAST-SQUARES; ECHO-PLANAR IMAGES; TENSOR MRI; CORPUS-CALLOSUM; WATER DIFFUSION;
D O I
10.1016/j.neuroimage.2015.06.068
中图分类号
Q189 [神经科学];
学科分类号
071006 [神经生物学];
摘要
Diffusion-weighted (DW) magnetic resonance imaging (MRI) is a unique method to investigate microstructural tissue properties noninvasively and is one of the most popular methods for studying the brain white matter in vivo. To obtain reliable statistical inferences with diffusion MRI, however, there are still many challenges, such as acquiring high-quality DW-MRI data (e.g., high SNR and high resolution), careful data preprocessing (e.g., correcting for subject motion and eddy current induced geometric distortions), choosing the appropriate diffusion approach (e.g., diffusion tensor imaging (DTI), diffusion kurtosis imaging (DKI), or diffusion spectrum MRI), and applying a robust analysis strategy (e.g., tractography based or voxel based analysis). Notwithstanding the numerous efforts to optimize many steps in this complex and lengthy diffusion analysis pipeline, to date, a well-known artifact in MRI -i.e., Gibbs ringing (GR)-has largely gone unnoticed or deemed insignificant as a potential confound in quantitative DW-MRI analysis. Considering the recent explosion of diffusion MRI applications in biomedical and clinical applications, a systematic and comprehensive investigation is necessary to understand the influence of GR on the estimation of diffusion measures. In this work, we demonstrate with simulations and experimental DW-MRI data that diffusion estimates are significantly affected by GR artifacts and we show that an off-the-shelf GR correction procedure based on total variation already can alleviate this issue substantially. (C) 2015 Elsevier Inc. All rights reserved.
引用
收藏
页码:441 / 455
页数:15
相关论文
共 130 条
[1]
Elimination of eddy current artifacts in diffusion-weighted echo-planar images: The use of bipolar gradients [J].
Alexander, AL ;
Tsuruda, JS ;
Parker, DL .
MAGNETIC RESONANCE IN MEDICINE, 1997, 38 (06) :1016-1021
[2]
Multiple-fiber reconstruction algorithms for diffusion MRI [J].
Alexander, DC .
WHITE MATTER IN COGNITIVE NEUROSCIENCE: ADVANCES IN DIFFUSION TENSOR IMAGING AND ITS APPLICATIONS, 2005, 1064 :113-+
[3]
A model-based method for retrospective correction of geometric distortions in diffusion-weighted EPI [J].
Andersson, JLR ;
Skare, S .
NEUROIMAGE, 2002, 16 (01) :177-199
[4]
How to correct susceptibility distortions in spin-echo echo-planar images: application to diffusion tensor imaging [J].
Andersson, JLR ;
Skare, S ;
Ashburner, J .
NEUROIMAGE, 2003, 20 (02) :870-888
[5]
A method to reduce the Gibbs ringing artifact in MRI scans while keeping tissue boundary integrity [J].
Archibald, R ;
Gelb, A .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2002, 21 (04) :305-319
[6]
Unified segmentation [J].
Ashburner, J ;
Friston, KJ .
NEUROIMAGE, 2005, 26 (03) :839-851
[7]
Composite hindered and restricted model of diffusion (CHARMED) MR imaging of the human brain [J].
Assaf, Y ;
Basser, PJ .
NEUROIMAGE, 2005, 27 (01) :48-58
[8]
New modeling and experimental framework to characterize hindered and restricted water diffusion in brain white matter [J].
Assaf, Y ;
Freidlin, RZ ;
Rohde, GK ;
Basser, PJ .
MAGNETIC RESONANCE IN MEDICINE, 2004, 52 (05) :965-978
[9]
A filter design method for minimizing ringing in a region of interest in MR spectroscopic images [J].
Bakir, T ;
Reeves, SJ .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2000, 19 (06) :585-600
[10]
Barker G, 2001, P 9 M INT SOC MAGN R, P1546