An integrated genetic, radiation hybrid, physical and transcription map of a region of distal mouse chromosome 12, including an imprinted locus and the 'Legs at odd angles' (Loa) mutation

被引:6
作者
Witherden, AS
Hafezparast, M
Nicholson, SJ
Ahmad-Annuar, A
Bermingham, N
Arac, D
Rankin, J
Iravani, M
Ball, S
Peters, J
Martin, JE
Huntley, D
Hummerich, H
Sergot, M
Fisher, EMC [1 ]
机构
[1] Univ London Imperial Coll Sci Technol & Med, Dept Neurogenet, London W2 1PG, England
[2] MRC, Mammalian Genet Unit, Harwell OX11 0RD, Berks, England
[3] Univ London Queen Mary & Westfield Coll, Dept Histopathol, London E1 1BB, England
[4] Univ London Imperial Coll Sci Technol & Med, Dept Comp, London SW7 2BZ, England
基金
英国医学研究理事会;
关键词
callipyge; legs at odd angles;
D O I
10.1016/S0378-1119(01)00853-8
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
A variety of loci with interesting patterns of regulation such as imprinted expression, and critical functions such as involvement in tumour necrosis factor pathways, map to a distal portion of mouse chromosome 12. This region also contains disease related loci including the 'Legs at odd angles' mutation (Loa) that A e are pursuing in a positional cloning project. To further define the region and prepare for comparative sequencing projects, we have produced genetic, radiation hybrid, physical and transcript maps, of the region, with probes providing anchors between the maps, We show a summary of 95 markers and 91 genomic clones that has enabled us to identify 18 transcripts including new, genes and candidates for Loci which will help in future studies of gene context and regulation. (C) 2002 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:71 / 82
页数:12
相关论文
共 32 条
[1]  
ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
[2]  
Brockmann GA, 1998, GENETICS, V150, P369
[3]   The callipyge mutation enhances the expression of coregulated imprinted genes in cis without affecting their imprinting status [J].
Charlier, C ;
Segers, K ;
Karim, L ;
Shay, T ;
Gyapay, G ;
Cockett, N ;
Georges, M .
NATURE GENETICS, 2001, 27 (04) :367-369
[4]   Human-ovine comparative sequencing of a 250-kb imprinted domain encompassing the callipyge (clpg) locus and identification of six imprinted transcripts:: DLK1, DAT, GTL2, PEG11, antiPEG11, and MEG8 [J].
Charlier, C ;
Segers, K ;
Wagenaar, D ;
Karim, L ;
Berghams, S ;
Jaillon, O ;
Shay, T ;
Weissenbach, J ;
Cockett, N ;
Gyapay, G ;
Georges, M .
GENOME RESEARCH, 2001, 11 (05) :850-862
[5]   INTERSPERSED REPETITIVE ELEMENT POLYMERASE CHAIN-REACTION PRODUCT MAPPING USING A MOUSE INTERSPECIFIC BACKCROSS [J].
COX, RD ;
COPELAND, NG ;
JENKINS, NA ;
LEHRACH, H .
GENOMICS, 1991, 10 (02) :375-384
[6]   Isolation of a novel human homologue of the gene coding for echinoderm microtubule-associated protein (EMAP) from the Usher syndrome type 1a locus at 14q32 [J].
Eudy, JD ;
MaEdmonds, M ;
Yao, SF ;
Talmadge, CB ;
Kelley, PM ;
Weston, MD ;
Kimberling, WJ ;
Sumegi, J .
GENOMICS, 1997, 43 (01) :104-106
[7]   The kinesin light chain gene: its mapping and exclusion in mouse and human forms of inherited motor neuron degeneration [J].
Hafezparast, M ;
Witherden, A ;
Nicholson, S ;
Bermingham, N ;
Mackin, J ;
ten Asbroek, A ;
Ball, S ;
Peters, J ;
Baas, F ;
Martin, JE ;
Fisher, EMC .
NEUROSCIENCE LETTERS, 1999, 273 (01) :49-52
[8]   A comprehensive large-insert yeast artificial chromosome library for physical mapping of the mouse genome [J].
Haldi, ML ;
Strickland, C ;
Lim, P ;
VanBerkel, V ;
Chen, XN ;
Noya, D ;
Korenberg, JR ;
Husain, Z ;
Miller, J ;
Lander, ES .
MAMMALIAN GENOME, 1996, 7 (10) :767-769
[9]   DELTA, A TRANSCRIPTION FACTOR THAT BINDS TO DOWNSTREAM ELEMENTS IN SEVERAL POLYMERASE-II PROMOTERS, IS A FUNCTIONALLY VERSATILE ZINC FINGER PROTEIN [J].
HARIHARAN, N ;
KELLEY, DE ;
PERRY, RP .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1991, 88 (21) :9799-9803
[10]   CAP3: A DNA sequence assembly program [J].
Huang, XQ ;
Madan, A .
GENOME RESEARCH, 1999, 9 (09) :868-877