Structure of a ribulose 5-phosphate 3-epimerase from Plasmodium falciparum

被引:16
作者
Caruthers, J
Bosch, J
Buckner, F
Van Voorhis, W
Myler, P
Worthey, E
Mehlin, C
Boni, E
DeTitta, G
Luft, J
Lauricella, A
Kalyuzhniy, O
Anderson, L
Zucker, F
Soltis, M
Hol, WGJ
机构
[1] Univ Washington, Dept Biochem, Seattle, WA 98195 USA
[2] Univ Washington, Div Infect Dis, Seattle, WA 98195 USA
[3] Univ Washington, Howard Hughes Med Inst, Seattle, WA 98195 USA
[4] Hauptman Woodward Inst, Buffalo, NY USA
[5] Seattle Biomed Res Inst, Seattle, WA 98109 USA
关键词
malaria; shikimate; heme detoxification;
D O I
10.1002/prot.20764
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The crystal structure of Pfa1009167AAA, a putative ribulose 5-phosphate 3-epimerase (PfalRPE) from Plasmodium falciparum, has been determined to 2 A resolution. RPE represents an exciting potential drug target for developing antimalarials because it is involved in the shikimate and the pentose phosphate pathways. The structure is a classic TIM-barrel fold. A coordinated Zn ion and a bound sulfate ion in the active site of the enzyme allow for a greater understanding of the mechanism of action of this enzyme. This structure is solved in the framework of the Structural Genomics of Pathogenic Protozoa (SGPP) consortium.
引用
收藏
页码:338 / 342
页数:5
相关论文
共 18 条
  • [1] [Anonymous], 892 WHO
  • [2] PlasmoDB:: the Plasmodium genome resource.: A database integrating experimental and computational data
    Bahl, A
    Brunk, B
    Crabtree, J
    Fraunholz, MJ
    Gajria, B
    Grant, GR
    Ginsburg, H
    Gupta, D
    Kissinger, JC
    Labo, P
    Li, L
    Mailman, MD
    Milgram, AJ
    Pearson, DS
    Roos, DS
    Schug, J
    Stoeckert, CJ
    Whetzel, P
    [J]. NUCLEIC ACIDS RESEARCH, 2003, 31 (01) : 212 - 215
  • [3] Data mining of the transcriptome of Plasmodium falciparum:: the pentose phosphate pathway and ancillary processes -: art. no. 17
    Bozdech, Z
    Ginsburg, H
    [J]. MALARIA JOURNAL, 2005, 4 (1)
  • [4] Brunger AT, 1998, ACTA CRYSTALLOGR D, V54, P905, DOI 10.1107/s0907444998003254
  • [5] CHAYEN N, 1992, J CRYST GROWTH, P176
  • [6] ExPASy: the proteomics server for in-depth protein knowledge and analysis
    Gasteiger, E
    Gattiker, A
    Hoogland, C
    Ivanyi, I
    Appel, RD
    Bairoch, A
    [J]. NUCLEIC ACIDS RESEARCH, 2003, 31 (13) : 3784 - 3788
  • [7] An integrated model of chloroquine action
    Ginsburg, H
    Ward, SA
    Bray, PG
    [J]. PARASITOLOGY TODAY, 1999, 15 (09): : 357 - 360
  • [8] Structure and catalytic mechanism of the cytosolic D-ribulose-5-phosphate 3-epimerase from rice
    Jelakovic, S
    Kopriva, S
    Süss, KH
    Schulz, GE
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2003, 326 (01) : 127 - 135
  • [9] JONES TA, 1990, MODEL METHODS MOL DE, P189
  • [10] Rapid automated molecular replacement by evolutionary search
    Kissinger, CR
    Gehlhaar, DK
    Fogel, DB
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 1999, 55 : 484 - 491