Integrating and annotating the interactome using the MiMI plugin for cytoscape

被引：98

作者：

Gao, Jing ^{[1
]}

Ade, Alex S. ^{[1
]}

Tarcea, V. Glenn ^{[1
]}

Weymouth, Terry E. ^{[1
]}

Mirel, Barbara R. ^{[1
]}

Jagadish, H. V. ^{[1
]}

States, David J. ^{[1
]}

机构：

[1] Univ Michigan, Ctr Computat Med & Biol, Natl Ctr Integrat Biomed Informat, Ann Arbor, MI 48109 USA

来源：

BIOINFORMATICS | 2009年 / 25卷 / 01期

基金：

美国国家卫生研究院;

关键词：

OPEN-SOURCE SOFTWARE; BIOLOGICAL NETWORKS;

D O I：

10.1093/bioinformatics/btn501

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

The MiMI molecular interaction repository integrates data from multiple sources, resolves interactions to standard gene names and symbols, links to annotation data from GO, MeSH and PubMed and normalizes the descriptions of interaction type. Here, we describe a Cytoscape plugin that retrieves interaction and annotation data from MiMI and links out to multiple data sources and tools. Community annotation of the interactome is supported.

引用

页码：137 / 138

页数：2

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