Elucidating the role of C/D snoRNA in rRNA processing and modification in Trypanosoma brucei

被引:43
作者
Barth, Sarit [1 ]
Shalem, Boaz [1 ]
Hury, Avraham [1 ]
Tkacz, Itai Dov [1 ]
Liang, Xue-Hai [1 ]
Uliel, Shai [1 ]
Myslyuk, Inna [1 ]
Doniger, Tirza [1 ]
Salmon-Divon, Mali [1 ]
Unger, Ron [1 ]
Michaeli, Shulamit [1 ]
机构
[1] Bar Ilan Univ, Mina & Everard Goodman Fac Life Sci, IL-52900 Ramat Gan, Israel
基金
以色列科学基金会;
关键词
D O I
10.1128/EC.00215-07
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Most eukaryotic C/D small nucleolar RNAs (snoRNAs) guide 2'-O methylation (Nm) on rRNA and are also involved in rRNA processing. The four core proteins that bind C/D snoRNA in Trypanosoma brucei are fibrillarin (NOP1), NOP56, NOP58, and SNU13. Silencing of NOP1 by RNA interference identified rRNA-processing and modification defects that caused lethality. Systematic mapping of 2'-O-methyls on rRNA revealed the existence of hypermethylation at certain positions of the rRNA in the bloodstream form of the parasites, suggesting that this modification may assist the parasites in coping with the major temperature changes during cycling between their insect and mammalian hosts. The rRNA-processing defects of NOP1-depleted cells suggest the involvement of C/D snoRNA in trypanosome-specific rRNA-processing events to generate the small rRNA fragments. MRP RNA, which is involved in rRNA processing, was identified in this study in one of the snoRNA gene clusters, suggesting that trypanosomes utilize a combination of unique C/D snoRNAs and conserved snoRNAs for rRNA processing.
引用
收藏
页码:86 / 101
页数:16
相关论文
共 68 条
[11]   Biogenesis of small nucleolar ribonucleoproteins [J].
Filipowicz, W ;
Pogacic, V .
CURRENT OPINION IN CELL BIOLOGY, 2002, 14 (03) :319-327
[12]   Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs [J].
Ganot, P ;
Bortolin, ML ;
Kiss, T .
CELL, 1997, 89 (05) :799-809
[13]   RIBOSOMAL-RNA OF THE TRYPANOSOMATID PROTOZOAN CRITHIDIA-FASCICULATA - PHYSICAL CHARACTERISTICS AND METHYLATED SEQUENCES [J].
GRAY, MW .
CANADIAN JOURNAL OF BIOCHEMISTRY, 1979, 57 (06) :914-926
[14]   Two 5′-ETS regions implicated in interactions with U3 snoRNA are required for small subunit rRNA maturation in Trypanosoma brucei [J].
Hartshorne, T ;
Toyofuku, W .
NUCLEIC ACIDS RESEARCH, 1999, 27 (16) :3300-3309
[15]   Distinct regions of U3 SnoRNA interact at two sites within the 5′ external transcribed spacer of pre-rRNAs in Trypanosoma brucei cells [J].
Hartshorne, T .
NUCLEIC ACIDS RESEARCH, 1998, 26 (11) :2541-2553
[16]   RNA-B IS THE MAJOR NUCLEOLAR TRIMETHYLGUANOSINE-CAPPED SMALL NUCLEAR-RNA ASSOCIATED WITH FIBRILLARIN AND PRE-RIBOSOMAL-RNAS IN TRYPANOSOMA-BRUCEI [J].
HARTSHORNE, T ;
AGABIAN, N .
MOLECULAR AND CELLULAR BIOLOGY, 1993, 13 (01) :144-154
[17]   Trypanosoma brucei 5′ETS A′-cleavage is directed by 3′-adjacent sequences, but not two U3 snoRNA-binding elements, which are all required for subsequent pre-small subunit rRNA processing events [J].
Hartshorne, T ;
Toyofuku, W ;
Hollenbaugh, J .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 313 (04) :733-749
[18]   Profiling Caenorhabditis elegans non-coding RNA expression with a combined microarray [J].
He, Housheng ;
Cai, Lun ;
Skogerbo, Geir ;
Deng, Wei ;
Liu, Tao ;
Zhu, Xiaopeng ;
Wang, Yudong ;
Jia, Dong ;
Zhang, Zhihua ;
Tao, Yong ;
Zeng, Haipan ;
Aftab, Muhammad Nauman ;
Cui, Yan ;
Liu, Guozhen ;
Chen, Runsheng .
NUCLEIC ACIDS RESEARCH, 2006, 34 (10) :2976-2983
[19]   EVOLUTIONARY CONSERVATION OF THE HUMAN NUCLEOLAR PROTEIN FIBRILLARIN AND ITS FUNCTIONAL EXPRESSION IN YEAST [J].
JANSEN, RP ;
HURT, EC ;
KERN, H ;
LEHTONEN, H ;
CARMOFONSECA, M ;
LAPEYRE, B ;
TOLLERVEY, D .
JOURNAL OF CELL BIOLOGY, 1991, 113 (04) :715-729
[20]   Species specificity in ribosome biogenesis:: a nonconserved phosphoprotein is required for formation of the large ribosomal subunit in Trypanosoma brucei [J].
Jensen, BC ;
Brekken, DL ;
Randall, AC ;
Kifer, CT ;
Parsons, M .
EUKARYOTIC CELL, 2005, 4 (01) :30-35