Characterization of extracellular RNAs produced by the marine photosynthetic bacterium Rhodovulum sulfidophilum

被引:30
作者
Ando, Tomoaki [1 ]
Suzuki, Hiromichi [1 ]
Nishimura, Seiichiro [1 ]
Tanaka, Terumichi [1 ]
Hiraishi, Akira [1 ]
Kikuchi, Yo [1 ]
机构
[1] Toyohashi Univ Technol, Dept Ecol Engn, Div Biosci & Biotechnol, Toyohashi, Aichi 4418580, Japan
关键词
extracellular RNA; flocculation; photosynthetic bacterium; Rhodovulum sulfidophilum; RNA cloning;
D O I
10.1093/jb/mvj091
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The marine photosynthetic bacterium Rhodovulum sulfidophilum produces extracellular nucleic acids that are involved in its flocculation. These were found to be produced concomitantly with cell growth. The RNA fraction of these extracellular nucleic acids was subjected to cDNA analysis by applying a micro RNA cloning method and found to contain mainly fully mature-sized tRNAs and fragments of 16S and 23S rRNAs. Analyses of modified bases and genes of the RNAs revealed no structural difference between the intracellular and extracellular RNAs. This is the first report of structural analyses of bacterial extracellular RNAs.
引用
收藏
页码:805 / 811
页数:7
相关论文
共 19 条
[1]   RNA interference is mediated by 21-and 22-nucleotide RNAs [J].
Elbashir, SM ;
Lendeckel, W ;
Tuschl, T .
GENES & DEVELOPMENT, 2001, 15 (02) :188-200
[2]  
GROSJEAN H, 1998, MODIFICATION EDITING, P21
[3]   RHODOPSEUDOMONAS-SULFIDOPHILA, NOV SPEC - A NEW SPECIES OF PURPLE NONSULFUR BACTERIA [J].
HANSEN, TA ;
VELDKAMP, H .
ARCHIV FUR MIKROBIOLOGIE, 1973, 92 (01) :45-58
[4]   Natural competence in the genus Streptococcus: Evidence that streptococci can change pherotype by interspecies recombinational exchanges [J].
Havarstein, LS ;
Hakenbeck, R ;
Gaustad, P .
JOURNAL OF BACTERIOLOGY, 1997, 179 (21) :6589-6594
[5]   AN UNMODIFIED HEPTADECAPEPTIDE PHEROMONE INDUCES COMPETENCE FOR GENETIC-TRANSFORMATION IN STREPTOCOCCUS-PNEUMONIAE [J].
HAVARSTEIN, LS ;
COOMARASWAMY, G ;
MORRISON, DA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (24) :11140-11144
[6]   INTRAGENERIC STRUCTURE OF THE GENUS RHODOBACTER - TRANSFER OF RHODOBACTER-SULFIDOPHILUS AND RELATED MARINE SPECIES TO THE GENUS RHODOVULUM GEN-NOV [J].
HIRAISHI, A ;
UEDA, Y .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1994, 44 (01) :15-23
[7]   ISOLATION AND CHARACTERIZATION OF RHODOVULUM-STRICTUM SP-NOV AND SOME OTHER PURPLE NONSULFUR BACTERIA FROM COLORED BLOOMS IN TIDAL AND SEAWATER POOLS [J].
HIRAISHI, A ;
UEDA, Y .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1995, 45 (02) :319-326
[8]   PURIFICATION AND CHARACTERIZATION OF EXTRACELLULAR POLYSACCHARIDE FROM ACTIVATED SLUDGES [J].
HORAN, NJ ;
ECCLES, CR .
WATER RESEARCH, 1986, 20 (11) :1427-1432
[9]   VIRULENCE FACTORS ARE RELEASED FROM PSEUDOMONAS-AERUGINOSA IN ASSOCIATION WITH MEMBRANE-VESICLES DURING NORMAL GROWTH AND EXPOSURE TO GENTAMICIN - A NOVEL MECHANISM OF ENZYME-SECRETION [J].
KADURUGAMUWA, JL ;
BEVERIDGE, TJ .
JOURNAL OF BACTERIOLOGY, 1995, 177 (14) :3998-4008
[10]   ON THE MECHANISM OF BREWERS-YEAST FLOCCULATION [J].
KAMADA, K ;
MURATA, M .
AGRICULTURAL AND BIOLOGICAL CHEMISTRY, 1984, 48 (10) :2423-2433