Multiple-quantum coherence dramatically enhances the sensitivity of CH and CH2 correlations in uniformly C-13-labeled RNA

被引:71
作者
Marino, JP
Diener, JL
Moore, PB
Griesinger, C
机构
[1] UNIV FRANKFURT, INST ORGAN CHEM, D-60439 FRANKFURT, GERMANY
[2] YALE UNIV, DEPT CHEM, NEW HAVEN, CT 06520 USA
关键词
D O I
10.1021/ja964379u
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
One-bond H-1, C-13 and geminal H-1,H-1 dipolar interactions are normally the dominant causes of H-1 and C-13 transverse relaxation in NMR experiments applied to C-13,N-15-labeled RNA in solution. Proton,carbon multiple-quantum coherences, where all heteronuclei connected by single bonds are evolved simultaneously in the transverse plane, however, are not affected by these strong dipolar interactions. Consequently, the transverse lifetimes, or T-2 values, of these resonances can be dramatically extended. Here, we show that pulse sequences can be written that take advantage of this effect to enhance the sensitivity with which CH and CH2 correlations are observed in uniformly C-13,N-15-labeled RNA oligonucleotides. In heteronuclear multiple-quantum correlation experiments, CH and CH2 correlations are detected with a sensitivity that is enhanced by about a factor of 3 relative to heteronuclear, single-quantum experiments for a C-13,N-15-labeled 36mer RNA oligonucleotide and a constant time period of 25 ms. By including H-1, C-13 multiple-quantum coherence steps in an H-1, C-13, N-15 NMR experiment of the ''out and back'' type currently used for through-bond resonance assignment in RNA, we have obtained a sensitivity enhancement of about a factor of 5 in the same 36mer RNA.
引用
收藏
页码:7361 / 7366
页数:6
相关论文
共 24 条
[1]   PREPARATION OF ISOTOPICALLY LABELED RIBONUCLEOTIDES FOR MULTIDIMENSIONAL NMR-SPECTROSCOPY OF RNA [J].
BATEY, RT ;
INADA, M ;
KUJAWINSKI, E ;
PUGLISI, JD ;
WILLIAMSON, JR .
NUCLEIC ACIDS RESEARCH, 1992, 20 (17) :4515-4523
[2]   UNAMBIGUOUS RESONANCE ASSIGNMENTS IN C-15,N-15-LABELED NUCLEIC-ACIDS BY 3D TRIPLE-RESONANCE NMR [J].
FARMER, BT ;
MULLER, L ;
NIKONOWICZ, EP ;
PARDI, A .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1993, 115 (23) :11040-11041
[3]   PROTON-DETECTED HETERONUCLEAR EDITED AND CORRELATED NUCLEAR-MAGNETIC-RESONANCE AND NUCLEAR OVERHAUSER EFFECT IN SOLUTION [J].
GRIFFEY, RH ;
REDFIELD, AG .
QUARTERLY REVIEWS OF BIOPHYSICS, 1987, 19 (1-2) :51-82
[4]   MULTIPLE-QUANTUM LINE NARROWING FOR MEASUREMENT OF H-ALPHA-H-BETA J-COUPLINGS IN ISOTOPICALLY ENRICHED PROTEINS [J].
GRZESIEK, S ;
KUBONIWA, H ;
HINCK, AP ;
BAX, A .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (19) :5312-5315
[5]  
GRZESIEK S, 1995, J BIOMOL NMR, V6, P335
[6]   SEQUENTIAL BACKBONE ASSIGNMENT IN C-13-LABELED RNA VIA THROUGH-BOND COHERENCE TRANSFER USING 3-DIMENSIONAL TRIPLE-RESONANCE SPECTROSCOPY (H-1, C-13, P-31) AND 2-DIMENSIONAL HETERO TOCSY [J].
HEUS, HA ;
WIJMENGA, SS ;
VANDEVEN, FJM ;
HILBERS, CW .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1994, 116 (11) :4983-4984
[7]   GRADIENT-ENHANCED SPECTROSCOPY [J].
HURD, RE .
JOURNAL OF MAGNETIC RESONANCE, 1990, 87 (02) :422-428
[8]   PURE ABSORPTION GRADIENT ENHANCED HETERONUCLEAR SINGLE QUANTUM CORRELATION SPECTROSCOPY WITH IMPROVED SENSITIVITY [J].
KAY, LE ;
KEIFER, P ;
SAARINEN, T .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (26) :10663-10665
[9]  
MADI ZL, COMMUNICATION
[10]   A 3-DIMENSIONAL TRIPLE-RESONANCE H-1,C-13,P-31 EXPERIMENT - SEQUENTIAL THROUGH-BOND CORRELATION OF RIBOSE PROTONS AND INTERVENING PHOSPHORUS ALONG THE RNA OLIGONUCLEOTIDE BACKBONE [J].
MARINO, JP ;
SCHWALBE, H ;
ANKLIN, C ;
BERMEL, W ;
CROTHERS, DM ;
GRIESINGER, C .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1994, 116 (14) :6472-6473