Modeling flexibility in metal-organic frameworks: Comparison between Density-Functional Tight-Binding and Universal Force Field approaches for bonded interactions

被引:29
作者
Garberoglio, Giovanni [1 ]
Taioli, Simone [2 ,3 ,4 ]
机构
[1] FBK CMM, Interdisciplinary Lab Computat Sci LISC, I-38123 Povo, TN, Italy
[2] Univ Trento, Dept Phys, I-38123 Povo, TN, Italy
[3] Ist Nazl Fis Nucl, Sez Perugia, Perugia, Italy
[4] Univ Bologna, Dept Chem, I-40126 Bologna, Italy
关键词
Metal-organic frameworks; Computer modeling; Universal Force Field; Density-Functional Tight-Binding method; MOLECULAR-DYNAMICS SIMULATIONS; HYDROGEN ADSORPTION SITES; DFTB METHOD; IMIDAZOLATE FRAMEWORKS; COMPLEX MATERIALS; SCC-DFTB; DIFFUSION; ENERGIES; METHANE; STORAGE;
D O I
10.1016/j.micromeso.2012.07.026
中图分类号
O69 [应用化学];
学科分类号
081704 ;
摘要
In this work we use Density-Functional Tight-Binding (DFTB) to investigate dynamical processes dependent on the flexibility in metal-organic frameworks (MOFs). We show that one can perform DFTB simulations on systems having unit cells of several hundreds atoms at a modest computational cost. This approach is validated by calculating the barriers to diffusion for small molecules (hydrogen, carbon dioxide, and methane) crossing the windows connecting the pores of ZIF-7 and ZIF-8, two prototypical materials that have been the subject of many experimental and theoretical investigations. Additionally, we calculate the vibrational densities of states for MOF-5 and ZIF-8. These calculations are compared with simulations using the bonded and non-bonded part of the Universal Force Field (UFF). The results show that UFF's description of the bonded interactions has a quality comparable to DFTB's, at an even smaller computational cost. (c) 2012 Elsevier Inc. All rights reserved.
引用
收藏
页码:215 / 220
页数:6
相关论文
共 47 条
[1]   Mechanism of benzene diffusion in MOF-5: A molecular dynamics investigation [J].
Amirjalayer, Saeed ;
Schmid, Rochus .
MICROPOROUS AND MESOPOROUS MATERIALS, 2009, 125 (1-2) :90-96
[2]   DFTB+, a sparse matrix-based implementation of the DFTB method [J].
Aradi, B. ;
Hourahine, B. ;
Frauenheim, Th. .
JOURNAL OF PHYSICAL CHEMISTRY A, 2007, 111 (26) :5678-5684
[3]   Hydrogen Adsorption Sites in Zeolite Imidazolate Frameworks ZIF-8 and ZIF-11 [J].
Assfour, Bassem ;
Leoni, Stefano ;
Seifert, Gotthard .
JOURNAL OF PHYSICAL CHEMISTRY C, 2010, 114 (31) :13381-13384
[4]   Hydrogen adsorption sites and energies in 2D and 3D covalent organic frameworks [J].
Assfour, Bassem ;
Seifert, Gotthard .
CHEMICAL PHYSICS LETTERS, 2010, 489 (1-3) :86-91
[5]   Zeolitic imidazolate frameworks for separation of binary mixtures of CO2, CH4, N2 and H2: A computer simulation investigation [J].
Battisti, Anna ;
Taioli, Simone ;
Garberoglio, Giovanni .
MICROPOROUS AND MESOPOROUS MATERIALS, 2011, 143 (01) :46-53
[6]   Communications: Ab initio dynamics of rare thermally activated reactions [J].
Beccara, S. A. ;
Garberoglio, G. ;
Faccioli, P. ;
Pederiva, F. .
JOURNAL OF CHEMICAL PHYSICS, 2010, 132 (11)
[7]   APPLICATION OF A UNIVERSAL FORCE-FIELD TO ORGANIC-MOLECULES [J].
CASEWIT, CJ ;
COLWELL, KS ;
RAPPE, AK .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (25) :10035-10046
[8]   Design of new materials for methane storage [J].
Düren, T ;
Sarkisov, L ;
Yaghi, OM ;
Snurr, RQ .
LANGMUIR, 2004, 20 (07) :2683-2689
[9]   Self-consistent-charge density-functional tight-binding method for simulations of complex materials properties [J].
Elstner, M ;
Porezag, D ;
Jungnickel, G ;
Elsner, J ;
Haugk, M ;
Frauenheim, T ;
Suhai, S ;
Seifert, G .
PHYSICAL REVIEW B, 1998, 58 (11) :7260-7268
[10]   The SCC-DFTB method and its application to biological systems [J].
Elstner, M. .
THEORETICAL CHEMISTRY ACCOUNTS, 2006, 116 (1-3) :316-325