Structural Studies of a Bacterial Condensin Complex Reveal ATP-Dependent Disruption of Intersubunit Interactions

被引:122
作者
Woo, Jae-Sung [1 ,2 ]
Lim, Jae-Hong [1 ,2 ]
Shin, Ho-Chul [1 ,2 ]
Suh, Min-Kang [1 ,2 ]
Ku, Bonsu [1 ,2 ]
Lee, Kwang-Hoon [1 ,2 ]
Joo, Keehyoung [3 ]
Robinson, Howard [4 ]
Lee, Jooyoung [3 ]
Park, Sam-Yong [5 ]
Ha, Nam-Chul [6 ]
Oh, Byung-Ha [1 ,2 ]
机构
[1] Pohang Univ Sci & Technol, Ctr Biomol Recognit, Pohang 790784, South Korea
[2] Pohang Univ Sci & Technol, Div Mol & Life Sci, Dept Life Sci, Pohang 790784, South Korea
[3] Korea Inst Adv Study, Sch Computat Sci, Seoul 130722, South Korea
[4] Brookhaven Natl Lab, Dept Biol, Upton, NY 11973 USA
[5] Yokohama City Univ, Prot Design Lab, Tsurumi Ku, Yokohama, Kanagawa 2300045, Japan
[6] Pusan Natl Univ, Coll Pharm, Pusan 609735, South Korea
关键词
ESCHERICHIA-COLI; CHROMOSOME CONDENSATION; BACILLUS-SUBTILIS; SMC PROTEINS; CELL-CYCLE; MITOTIC CHROMOSOME; MUKB; DNA; LOCALIZATION; SEGREGATION;
D O I
10.1016/j.cell.2008.10.050
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Condensins are key mediators of chromosome condensation across organisms. Like other condensins, the bacterial MukBEF condensin complex consists of an SMC family protein dimer containing two ATPase head domains, MukB, and two interacting subunits, MukE and MukF. We report complete structural views of the intersubunit interactions of this condensin along with ensuing studies that reveal a role for the ATPase activity of MukB. MukE and MukF together form an elongated dimeric frame, and MukF's C-terminal winged-helix domains (C-WHDs) bind MukB heads to constitute closed ring-like structures. Surprisingly, one of the two bound C-WHDs is forced to detach upon ATP-mediated engagement of MukB heads. This detachment reaction depends on the linker segment preceding the C-WHD, and mutations on the linker restrict cell growth. Thus ATP-dependent transient disruption of the MukB-MukF interaction, which creates openings in condensin ring structures, is likely to be a critical feature of the functional mechanism of condensins.
引用
收藏
页码:85 / 96
页数:12
相关论文
共 29 条
[1]   Characterization of a prokaryotic SMC protein involved in chromosome partitioning [J].
Britton, RA ;
Lin, DCH ;
Grossman, AD .
GENES & DEVELOPMENT, 1998, 12 (09) :1254-1259
[2]   The evolution of SMC proteins: Phylogenetic analysis and structural implications [J].
Cobbe, N ;
Heck, MMS .
MOLECULAR BIOLOGY AND EVOLUTION, 2004, 21 (02) :332-347
[3]   MukB acts as a macromolecular clamp in DNA condensation [J].
Cui, Yuanbo ;
Petrushenko, Zoya M. ;
Rybenkov, Valentin V. .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2008, 15 (04) :411-418
[4]   CONSTRUCTION OF AN EAE DELETION MUTANT OF ENTEROPATHOGENIC ESCHERICHIA-COLI BY USING A POSITIVE-SELECTION SUICIDE VECTOR [J].
DONNENBERG, MS ;
KAPER, JB .
INFECTION AND IMMUNITY, 1991, 59 (12) :4310-4317
[5]   The MukF subunit of Escherichia coli condensin:: architecture and functional relationship to kleisins [J].
Fennell-Fezzie, R ;
Gradia, SD ;
Akey, D ;
Berger, JM .
EMBO JOURNAL, 2005, 24 (11) :1921-1930
[6]   Structure and stability of cohesin's Smc1-kleisin interaction [J].
Haering, CH ;
Schoffnegger, D ;
Nishino, T ;
Helmhart, W ;
Nasmyth, K ;
Löwe, J .
MOLECULAR CELL, 2004, 15 (06) :951-964
[7]   Positive and negative regulation of SMC-DNA interactions by ATP and accessory proteins [J].
Hirano, M ;
Hirano, T .
EMBO JOURNAL, 2004, 23 (13) :2664-2673
[8]   At the heart of the chromosome: SMC proteins in action [J].
Hirano, T .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2006, 7 (05) :311-322
[9]   Condensins, chromosome condensation protein complexes containing XCAP-C, XCAP-E and a Xenopus homolog of the Drosophila Barren protein [J].
Hirano, T ;
Kobayashi, R ;
Hirano, M .
CELL, 1997, 89 (04) :511-521
[10]   A HETERODIMERIC COILED-COIL PROTEIN REQUIRED FOR MITOTIC CHROMOSOME CONDENSATION IN-VITRO [J].
HIRANO, T ;
MITCHISON, TJ .
CELL, 1994, 79 (03) :449-458