The protein folding 'speed limit'

被引:698
作者
Kubelka, J [1 ]
Hofrichter, J [1 ]
Eaton, WA [1 ]
机构
[1] NIDDKD, Phys Chem Lab, NIH, Bethesda, MD 20892 USA
关键词
D O I
10.1016/j.sbi.2004.01.013
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
How fast can a protein possibly fold? This question has stimulated experimentalists to seek fast folding proteins and to engineer them to fold even faster. Proteins folding at or near the speed limit are prime candidates for all-atom molecular dynamics simulations. They may also have no free energy barrier, allowing the direct observation of intermediate structures on the pathways from the unfolded to the folded state. Both experimental and theoretical approaches predict a speed limit of approximately N/100 mus for a generic N-residue single-domain protein, with a proteins folding faster than beta or alphabeta. The predicted limits suggest that most known ultrafast folding proteins can be engineered to fold more than ten times faster.
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页码:76 / 88
页数:13
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