共 21 条
Diving Through the "-Omics": The Case for Deep Phenotyping and Systems Epidemiology
被引:44
作者:

Haring, Robin
论文数: 0 引用数: 0
h-index: 0
机构:
Ernst Moritz Arndt Univ Greifswald, Inst Clin Chem & Lab Med, D-17475 Greifswald, Germany
Boston Univ, Sch Med, Prevent Med & Epidemiol Sect, Boston, MA 02118 USA Ernst Moritz Arndt Univ Greifswald, Inst Clin Chem & Lab Med, D-17475 Greifswald, Germany

Wallaschofski, Henri
论文数: 0 引用数: 0
h-index: 0
机构:
Ernst Moritz Arndt Univ Greifswald, Inst Clin Chem & Lab Med, D-17475 Greifswald, Germany Ernst Moritz Arndt Univ Greifswald, Inst Clin Chem & Lab Med, D-17475 Greifswald, Germany
机构:
[1] Ernst Moritz Arndt Univ Greifswald, Inst Clin Chem & Lab Med, D-17475 Greifswald, Germany
[2] Boston Univ, Sch Med, Prevent Med & Epidemiol Sect, Boston, MA 02118 USA
关键词:
LARGE SOCIAL NETWORK;
HUMAN-DISEASE;
ASSOCIATION;
MEDICINE;
BIOLOGY;
OBESITY;
RISK;
MICE;
ERA;
D O I:
10.1089/omi.2011.0108
中图分类号:
Q81 [生物工程学(生物技术)];
Q93 [微生物学];
学科分类号:
071005 ;
0836 ;
090102 ;
100705 ;
摘要:
Enabled by diverse high-throughput technologies, the rapidly evolving field of "-omics sciences" offers the potential to study health and disease in breadth and depth at the human population level. We have recently linked genomics and metabolomics to present the first genome-wide association study of metabolic traits in human urine providing new insights into the functional background of chronic kidney disease. We propose systems epidemiology as a novel approach to study the complexities of human pathophysiology by integrating various population-level omic-metrics and to identify new trans-omic biomarkers.
引用
收藏
页码:231 / 234
页数:4
相关论文
共 21 条
[1]
Correlation network analysis for data integration and biomarker selection
[J].
Adourian, Aram
;
Jennings, Ezra
;
Balasubramanian, Raji
;
Hines, Wade M.
;
Damian, Doris
;
Plasterer, Thomas N.
;
Clish, Clary B.
;
Stroobant, Paul
;
McBurney, Robert
;
Verheij, Elwin R.
;
Bobeldijk, Ivana
;
Van der Greef, Jan
;
Lindberg, Johan
;
Kenne, Kerstin
;
Andersson, Ulf
;
Hellmold, Heike
;
Nilsson, Kerstin
;
Salter, Hugh
;
Schuppe-Koistinen, Ina
.
MOLECULAR BIOSYSTEMS,
2008, 4 (03)
:249-259

Adourian, Aram
论文数: 0 引用数: 0
h-index: 0
机构:
BG Med Inc, Waltham, MA USA BG Med Inc, Waltham, MA USA

Jennings, Ezra
论文数: 0 引用数: 0
h-index: 0
机构:
BG Med Inc, Waltham, MA USA BG Med Inc, Waltham, MA USA

Balasubramanian, Raji
论文数: 0 引用数: 0
h-index: 0
机构:
BG Med Inc, Waltham, MA USA BG Med Inc, Waltham, MA USA

Hines, Wade M.
论文数: 0 引用数: 0
h-index: 0
机构:
BG Med Inc, Waltham, MA USA BG Med Inc, Waltham, MA USA

Damian, Doris
论文数: 0 引用数: 0
h-index: 0
机构:
BG Med Inc, Waltham, MA USA BG Med Inc, Waltham, MA USA

Plasterer, Thomas N.
论文数: 0 引用数: 0
h-index: 0
机构:
BG Med Inc, Waltham, MA USA BG Med Inc, Waltham, MA USA

Clish, Clary B.
论文数: 0 引用数: 0
h-index: 0
机构:
BG Med Inc, Waltham, MA USA BG Med Inc, Waltham, MA USA

Stroobant, Paul
论文数: 0 引用数: 0
h-index: 0
机构:
BG Med Inc, Waltham, MA USA BG Med Inc, Waltham, MA USA

McBurney, Robert
论文数: 0 引用数: 0
h-index: 0
机构:
BG Med Inc, Waltham, MA USA BG Med Inc, Waltham, MA USA

Verheij, Elwin R.
论文数: 0 引用数: 0
h-index: 0
机构:
BG Med Inc, Waltham, MA USA
TNO Quality Life, Dept Analyt Sci, Zeist, Netherlands BG Med Inc, Waltham, MA USA

Bobeldijk, Ivana
论文数: 0 引用数: 0
h-index: 0
机构:
BG Med Inc, Waltham, MA USA
TNO Quality Life, Dept Analyt Sci, Zeist, Netherlands BG Med Inc, Waltham, MA USA

Van der Greef, Jan
论文数: 0 引用数: 0
h-index: 0
机构:
BG Med Inc, Waltham, MA USA
TNO Quality Life, Dept Analyt Sci, Zeist, Netherlands BG Med Inc, Waltham, MA USA

Lindberg, Johan
论文数: 0 引用数: 0
h-index: 0
机构:
AstraZeneca R&D, S-15185 Sodertalje, Sweden BG Med Inc, Waltham, MA USA

Kenne, Kerstin
论文数: 0 引用数: 0
h-index: 0
机构:
AstraZeneca R&D, S-15185 Sodertalje, Sweden BG Med Inc, Waltham, MA USA

Andersson, Ulf
论文数: 0 引用数: 0
h-index: 0
机构:
AstraZeneca R&D, S-15185 Sodertalje, Sweden BG Med Inc, Waltham, MA USA

Hellmold, Heike
论文数: 0 引用数: 0
h-index: 0
机构:
AstraZeneca R&D, S-15185 Sodertalje, Sweden BG Med Inc, Waltham, MA USA

Nilsson, Kerstin
论文数: 0 引用数: 0
h-index: 0
机构:
AstraZeneca R&D, S-15185 Sodertalje, Sweden BG Med Inc, Waltham, MA USA

Salter, Hugh
论文数: 0 引用数: 0
h-index: 0
机构:
AstraZeneca R&D, S-15185 Sodertalje, Sweden BG Med Inc, Waltham, MA USA

Schuppe-Koistinen, Ina
论文数: 0 引用数: 0
h-index: 0
机构:
AstraZeneca R&D, S-15185 Sodertalje, Sweden BG Med Inc, Waltham, MA USA
[2]
Closing the Scientific Loop: Bridging Correlation and Causality in the Petaflop Age
[J].
An, Gary
.
SCIENCE TRANSLATIONAL MEDICINE,
2010, 2 (41)

An, Gary
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Chicago, Dept Surg, Sect Gen Surg, Chicago, IL 60637 USA Univ Chicago, Dept Surg, Sect Gen Surg, Chicago, IL 60637 USA
[3]
Network medicine -: From obesity to the "Diseasome''
[J].
Barabasi, Albert-Laszlo
.
NEW ENGLAND JOURNAL OF MEDICINE,
2007, 357 (04)
:404-407

Barabasi, Albert-Laszlo
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Notre Dame, Dept Phys, Ctr Complex Network Res, Notre Dame, IN 46556 USA Univ Notre Dame, Dept Phys, Ctr Complex Network Res, Notre Dame, IN 46556 USA
[4]
Network medicine: a network-based approach to human disease
[J].
Barabasi, Albert-Laszlo
;
Gulbahce, Natali
;
Loscalzo, Joseph
.
NATURE REVIEWS GENETICS,
2011, 12 (01)
:56-68

Barabasi, Albert-Laszlo
论文数: 0 引用数: 0
h-index: 0
机构:
Northeastern Univ, Ctr Complex Networks Res, Dana Res Ctr 111, Boston, MA 02115 USA
Northeastern Univ, Dept Phys, Dana Res Ctr 111, Boston, MA 02115 USA
Dana Farber Canc Inst, Ctr Canc Syst Biol, Boston, MA 02115 USA
Harvard Univ, Sch Med, Dept Med, Brigham & Womens Hosp, Boston, MA 02115 USA Northeastern Univ, Ctr Complex Networks Res, Dana Res Ctr 111, Boston, MA 02115 USA

Gulbahce, Natali
论文数: 0 引用数: 0
h-index: 0
机构:
Northeastern Univ, Ctr Complex Networks Res, Dana Res Ctr 111, Boston, MA 02115 USA
Northeastern Univ, Dept Phys, Dana Res Ctr 111, Boston, MA 02115 USA
Dana Farber Canc Inst, Ctr Canc Syst Biol, Boston, MA 02115 USA
Univ Calif San Francisco, Dept Cellular & Mol Pharmacol, San Francisco, CA 94158 USA Northeastern Univ, Ctr Complex Networks Res, Dana Res Ctr 111, Boston, MA 02115 USA

Loscalzo, Joseph
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Dept Med, Brigham & Womens Hosp, Boston, MA 02115 USA Northeastern Univ, Ctr Complex Networks Res, Dana Res Ctr 111, Boston, MA 02115 USA
[5]
The collective dynamics of smoking in a large social network
[J].
Christakis, Nicholas A.
;
Fowler, James H.
.
NEW ENGLAND JOURNAL OF MEDICINE,
2008, 358 (21)
:2249-2258

Christakis, Nicholas A.
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Dept Hlth Care Policy, Boston, MA 02115 USA
Mt Auburn Hosp, Dept Med, Cambridge, MA USA
Harvard Univ, Dept Sociol, Cambridge, MA 02138 USA Harvard Univ, Sch Med, Dept Hlth Care Policy, Boston, MA 02115 USA

Fowler, James H.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Polit Sci, San Diego, CA 92103 USA Harvard Univ, Sch Med, Dept Hlth Care Policy, Boston, MA 02115 USA
[6]
The spread of obesity in a large social network over 32 years
[J].
Christakis, Nicholas A.
;
Fowler, James H.
.
NEW ENGLAND JOURNAL OF MEDICINE,
2007, 357 (04)
:370-379

Christakis, Nicholas A.
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Dept Hlth Care Policy, Boston, MA 02115 USA

Fowler, James H.
论文数: 0 引用数: 0
h-index: 0
机构: Harvard Univ, Sch Med, Dept Hlth Care Policy, Boston, MA 02115 USA
[7]
Integration of metabolomics and transcriptomics data to aid biomarker discovery in type 2 diabetes
[J].
Connor, Susan C.
;
Hansen, Michael K.
;
Corner, Adam
;
Smith, Randall F.
;
Ryan, Terence E.
.
MOLECULAR BIOSYSTEMS,
2010, 6 (05)
:909-921

Connor, Susan C.
论文数: 0 引用数: 0
h-index: 0
机构:
GlaxoSmithKline, Discovery Res, Ware, Herts, England GlaxoSmithKline, Discovery Res, Ware, Herts, England

Hansen, Michael K.
论文数: 0 引用数: 0
h-index: 0
机构:
GlaxoSmithKline, Discovery Res, King Of Prussia, PA 19406 USA GlaxoSmithKline, Discovery Res, Ware, Herts, England

Corner, Adam
论文数: 0 引用数: 0
h-index: 0
机构:
Ingenu Syst Inc, Redwood City, CA 94063 USA GlaxoSmithKline, Discovery Res, Ware, Herts, England

Smith, Randall F.
论文数: 0 引用数: 0
h-index: 0
机构:
GlaxoSmithKline, Safety Assessment, King Of Prussia, PA 19406 USA GlaxoSmithKline, Discovery Res, Ware, Herts, England

Ryan, Terence E.
论文数: 0 引用数: 0
h-index: 0
机构:
GlaxoSmithKline, Discovery Res, King Of Prussia, PA 19406 USA GlaxoSmithKline, Discovery Res, Ware, Herts, England
[8]
Is "X"-WAS the Future for All of Epidemiology?
[J].
Fallin, Margaret Daniele
;
Kao, W. H. Linda
.
EPIDEMIOLOGY,
2011, 22 (04)
:457-459

Fallin, Margaret Daniele
论文数: 0 引用数: 0
h-index: 0
机构:
Johns Hopkins Univ, Bloomberg Sch Publ Hlth, Sch Med, Dept Epidemiol & Biostat, Baltimore, MD USA
Johns Hopkins Univ, Sch Med, Dept Med, Bloomberg Sch Publ Hlth, Baltimore, MD 21205 USA Johns Hopkins Univ, Bloomberg Sch Publ Hlth, Sch Med, Dept Epidemiol & Biostat, Baltimore, MD USA

Kao, W. H. Linda
论文数: 0 引用数: 0
h-index: 0
机构:
Johns Hopkins Univ, Sch Med, Dept Med, Bloomberg Sch Publ Hlth, Baltimore, MD 21205 USA
Johns Hopkins Univ, Sch Med, Dept Epidemiol, Bloomberg Sch Publ Hlth, Baltimore, MD USA Johns Hopkins Univ, Bloomberg Sch Publ Hlth, Sch Med, Dept Epidemiol & Biostat, Baltimore, MD USA
[9]
The human disease network
[J].
Goh, Kwang-Il
;
Cusick, Michael E.
;
Valle, David
;
Childs, Barton
;
Vidal, Marc
;
Barabasi, Albert-Laszlo
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
2007, 104 (21)
:8685-8690

Goh, Kwang-Il
论文数: 0 引用数: 0
h-index: 0
机构: Univ Notre Dame, Ctr Complex Network Res, Notre Dame, IN 46556 USA

Cusick, Michael E.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Notre Dame, Ctr Complex Network Res, Notre Dame, IN 46556 USA

Valle, David
论文数: 0 引用数: 0
h-index: 0
机构: Univ Notre Dame, Ctr Complex Network Res, Notre Dame, IN 46556 USA

Childs, Barton
论文数: 0 引用数: 0
h-index: 0
机构: Univ Notre Dame, Ctr Complex Network Res, Notre Dame, IN 46556 USA

Vidal, Marc
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Notre Dame, Ctr Complex Network Res, Notre Dame, IN 46556 USA Univ Notre Dame, Ctr Complex Network Res, Notre Dame, IN 46556 USA

Barabasi, Albert-Laszlo
论文数: 0 引用数: 0
h-index: 0
机构: Univ Notre Dame, Ctr Complex Network Res, Notre Dame, IN 46556 USA
[10]
The chemical genomic portrait of yeast: Uncovering a phenotype for all genes
[J].
Hillenmeyer, Maureen E.
;
Fung, Eula
;
Wildenhain, Jan
;
Pierce, Sarah E.
;
Hoon, Shawn
;
Lee, William
;
Proctor, Michael
;
St Onge, Robert P.
;
Tyers, Mike
;
Koller, Daphne
;
Altman, Russ B.
;
Davis, Ronald W.
;
Nislow, Corey
;
Giaever, Guri
.
SCIENCE,
2008, 320 (5874)
:362-365

Hillenmeyer, Maureen E.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Stanford Univ, Program Biomed Informat, Palo Alto, CA 94304 USA Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

Fung, Eula
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

Wildenhain, Jan
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Toronto, Mt Sinai Hosp, Samuel Lunenfeld Res Inst, Toronto, ON M5G 1X5, Canada Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

Pierce, Sarah E.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Stanford Univ, Dept Genet, Palo Alto, CA 94304 USA Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

Hoon, Shawn
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Stanford Univ, Dept Genet, Palo Alto, CA 94304 USA Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

Lee, William
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Stanford Univ, Dept Genet, Palo Alto, CA 94304 USA Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

Proctor, Michael
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

St Onge, Robert P.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

Tyers, Mike
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Toronto, Mt Sinai Hosp, Samuel Lunenfeld Res Inst, Toronto, ON M5G 1X5, Canada
Univ Toronto, Dept Mol Genet, Toronto, ON M5S 1A8, Canada Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

Koller, Daphne
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Comp Sci, Stanford, CA 94305 USA Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

Altman, Russ B.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Program Biomed Informat, Palo Alto, CA 94304 USA
Stanford Univ, Dept Genet, Palo Alto, CA 94304 USA Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

Davis, Ronald W.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Program Biomed Informat, Palo Alto, CA 94304 USA
Stanford Univ, Dept Genet, Palo Alto, CA 94304 USA Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

Nislow, Corey
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Toronto, Dept Mol Genet, Toronto, ON M5S 1A8, Canada
Univ Toronto, Donelley Ctr Cellular & Biomol Res, Toronto, ON M5S 3E1, Canada Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

Giaever, Guri
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Toronto, Dept Mol Genet, Toronto, ON M5S 1A8, Canada
Univ Toronto, Donelley Ctr Cellular & Biomol Res, Toronto, ON M5S 3E1, Canada
Univ Toronto, Dept Pharmaceut Sci, Toronto, ON M5S 3M2, Canada Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA