Cell wall proteomics of crops

被引:20
作者
Komatsu, Setsuko [1 ]
Yanagawa, Yuki [2 ]
机构
[1] Natl Agr & Food Res Org, Natl Inst Crop Sci, Tsukuba, Ibaraki 3058518, Japan
[2] RIKEN, Yokohama Inst, Plant Sci Ctr, Yokohama, Kanagawa, Japan
来源
FRONTIERS IN PLANT SCIENCE | 2013年 / 4卷
关键词
crop; proteomics; cell wall; drought stress; flooding stress; ROOT ELONGATION ZONE; EXTRACELLULAR-MATRIX; MAIZE; PROTEINS; IDENTIFICATION; MEDICAGO; LEAF; DESICCATION; EXPRESSION; SECRETOME;
D O I
10.3389/fpls.2013.00017
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Cell wall proteins play key roles in cell structure and metabolism, cell enlargement, signal transduction, responses to environmental stress, and many other physiological events. Agricultural crops are often used for investigating stress tolerance because cultivars with differing degrees of tolerance are available. Abiotic and biotic stress factors markedly influence the geographical distribution and yields of many crop species. Crop cell wall proteomics is of particular importance for improving crop productivity, particularly under unfavorable environmental conditions. To better understand the mechanisms underlying stress response in crops, cell wall proteomic analyses are being increasingly utilized. In this review, the methods of purification and purity assays of cell wall protein fractions from crops are described, and the results of protein identification using gel-based and gel-free proteomic techniques are presented. Furthermore, protein composition of the cell walls of rice, wheat, maize, and soybean are compared, and the role of cell wall proteins in crops under flooding and drought stress is discussed. This review will be useful for clarifying the role of the cell wall of crops in response to environmental stresses.
引用
收藏
页数:8
相关论文
共 61 条
[1]   A HYDROXYPROLINE-RICH PROTEIN IN THE SOYBEAN CELL-WALL [J].
AVERYHARTFULLARD, V ;
DATTA, K ;
MARCUS, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1988, 85 (04) :1082-1085
[2]   RopGAP4-dependent Rop GTPase rheostat control of Arabidopsis oxygen deprivation tolerance [J].
Baxter-Burrell, A ;
Yang, ZB ;
Springer, PS ;
Bailey-Serres, J .
SCIENCE, 2002, 296 (5575) :2026-2028
[3]   Arabidopsis cell wall proteome defined using multidimensional protein identification technology [J].
Bayer, EM ;
Bottrill, AR ;
Walshaw, J ;
Vigouroux, M ;
Naldrett, MJ ;
Thomas, CL ;
Maule, AJ .
PROTEOMICS, 2006, 6 (01) :301-311
[4]   Comparative proteomics analysis of differentially expressed proteins in chickpea extracellular matrix during dehydration stress [J].
Bhushan, Deepti ;
Pandey, Aarti ;
Choudhary, Mani Kant ;
Datta, Asis ;
Chakraborty, Subhra ;
Chakraborty, Niranjan .
MOLECULAR & CELLULAR PROTEOMICS, 2007, 6 (11) :1868-1884
[5]   Extracellular matrix proteome of chickpea (Cicer arietinum L.) illustrates pathway abundance, novel protein functions and evolutionary perspect [J].
Bhushan, Deepti ;
Pandey, Aarti ;
Chattopadhyay, Arnab ;
Choudhary, Mani Kant ;
Chakraborty, Subhra ;
Datta, Asis ;
Chakraborty, Niranjan .
JOURNAL OF PROTEOME RESEARCH, 2006, 5 (07) :1711-1720
[6]   Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes:: Identification by mass spectrometry and bioinformatics [J].
Boudart, G ;
Jamet, E ;
Rossignol, M ;
Lafitte, C ;
Borderies, G ;
Jauneau, A ;
Esquerré-Tugayé, MT ;
Pont-Lezica, R .
PROTEOMICS, 2005, 5 (01) :212-221
[7]   Proteomics of weakly bound cell wall proteins in rice calli [J].
Chen, Xiong-Yan ;
Kim, Sun Tae ;
Cho, Won Kyong ;
Rim, Yeonggil ;
Kim, Suwha ;
Kim, Seon-Won ;
Kang, Kyu Young ;
Park, Zee Yong ;
Kim, Jae-Yean .
JOURNAL OF PLANT PHYSIOLOGY, 2009, 166 (07) :675-685
[8]   Pathogen elicitor-induced changes in the maize extracellular matrix proteome [J].
Chivasa, S ;
Simon, WJ ;
Yu, XL ;
Yalpani, N ;
Slabas, AR .
PROTEOMICS, 2005, 5 (18) :4894-4904
[9]  
Chivasa S, 2002, ELECTROPHORESIS, V23, P1754, DOI 10.1002/1522-2683(200206)23:11<1754::AID-ELPS1754>3.0.CO
[10]  
2-E