A new batch-processing data-reduction application for X-ray diffraction data

被引:22
作者
Davies, RJ [1 ]
机构
[1] European Synchrotron Radiat Facil, F-38043 Grenoble 9, France
关键词
D O I
10.1107/S0021889806008697
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Modern synchrotron radiation facility beamlines offer high-brilliance beams and sensitive area detectors. Consequently, experiments such as scanning X-ray microdiffraction can generate large data sets within relatively short time periods. In these specialist fields there are currently very few automated data-treatment solutions to tackle the large data sets produced. Where there is existing software, it is either insufficiently specialized or cannot be operated in a batch-wise processing mode. As a result, a large gap exists between the rate at which X-ray diffraction data can be generated and the rate at which they can be realistically analysed. This article describes a new software application to perform batch-wise data reduction. It is designed to operate in combination with the commonly used Fit2D program. Through the use of intuitive file selection, numerous processing lists and a generic operation sequence, it is capable of the batch-wise reduction of up to 60 000 diffraction patterns during each treatment session. It can perform automated intensity corrections to large data series, perform advanced background-subtraction operations and automatically organizes results. Integration limits can be set graphically on-screen, uniquely derived from existing peak positions or globally calculated from user-supplied values. The software represents a working solution to a hitherto unsolved problem.
引用
收藏
页码:267 / 272
页数:6
相关论文
共 19 条
[1]   Recent developments in the PHENIX software for automated crystallographic structure determination [J].
Adams, PD ;
Gopal, K ;
Grosse-Kunstleve, RW ;
Hung, LW ;
Ioerger, TR ;
McCoy, AJ ;
Moriarty, NW ;
Pai, RK ;
Read, RJ ;
Romo, TD ;
Sacchettin, JC ;
Sauter, NK ;
Storoni, LC ;
Terwilligerf, TC .
JOURNAL OF SYNCHROTRON RADIATION, 2004, 11 :53-55
[2]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[3]   CRYSTALS version 12: software for guided crystal structure analysis [J].
Betteridge, PW ;
Carruthers, JR ;
Cooper, RI ;
Prout, K ;
Watkin, DJ .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2003, 36 :1487-1487
[4]   A batch-wise non-linear fitting and analysis tool for treating large X-ray diffraction data sets [J].
Davies, RJ .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2006, 39 :262-266
[5]   Modeling structural disorder within single poly(p-phenylenebenzobisoxazole) fibers using a submicrometer synchrotron beam [J].
Davies, RJ ;
Burghammer, M ;
Riekel, C .
MACROMOLECULES, 2005, 38 (08) :3364-3370
[6]   Crystal lattice deformation in single poly(p-phenylene benzobisoxazole) fibres [J].
Davies, RJ ;
Eichhorn, SJ ;
Riekel, C ;
Young, RJ .
POLYMER, 2004, 45 (22) :7693-7704
[7]   Single fibre deformation studies of poly(p-phenylene benzobisoxazole) fibres -: Part II -: Variation of crystal strain and crystallite orientation across the fibre [J].
Davies, RJ ;
Montes-Morán, MA ;
Riekel, C ;
Young, RJ .
JOURNAL OF MATERIALS SCIENCE, 2003, 38 (10) :2105-2115
[8]   Two-dimensional detector software: From real detector to idealised image or two-theta scan [J].
Hammersley, AP ;
Svensson, SO ;
Hanfland, M ;
Fitch, AN ;
Hausermann, D .
HIGH PRESSURE RESEARCH, 1996, 14 (4-6) :235-248
[9]  
Hammersley AP, 1998, ESRF98HA01T
[10]  
HAMMRSLEY AP, 1997, ESRF97HA02T