Phylogenomic analysis and evolution of the potassium channel gene family

被引:17
作者
Moulton, G
Attwood, TK
Parry-Smith, DJ
Packer, JCL
机构
[1] Univ Manchester, Sch Biol Sci, Manchester M13 9PT, Lancs, England
[2] Purely Prot, Cambridge, England
[3] Abbott Labs, Abbott Pk, IL 60064 USA
基金
英国医学研究理事会;
关键词
Caenorhabditis elegans; Drosophila melanogaster; exhaustive database mining; genome evolution; phylogenetic analysis; potassium channel;
D O I
10.3109/714041017
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Potassium channels govern the permeability of cells to potassium ions, thereby controlling the membrane potential. In metazoa, potassium channels are encoded by a large, diverse gene family. Previous analyses of this gene family have focused on its diversity in mammals. Here we have pursued a more comprehensive study in Caenorhabditis elegans, Drosophila melanogaster, and mammalian genomes. The investigation revealed 164 potassium channel encoding genes in C. elegans, D. melanogaster, and mammals, classified into seven conserved families, which we applied to phylogenetic analysis. The trees are discussed in relation to the assignment of orthologous relationships between genes and vertebrate genome duplication.
引用
收藏
页码:363 / 377
页数:15
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