Fly-TILL Reverse genetics using a living point mutation resource
被引:22
作者:
Cooper, Jennifer L.
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Howard Hughes Med Inst, Seattle, WA 98109 USA
Fred Hutchinson Canc Res Ctr, Div Basic Sci, Seattle, WA 98109 USAFred Hutchinson Canc Res Ctr, Howard Hughes Med Inst, Seattle, WA 98109 USA
Cooper, Jennifer L.
[1
,2
]
Till, Bradley J.
论文数: 0引用数: 0
h-index: 0
机构:
IAEA, FAO, Agr & Biotechnol Lab, Seibersdorf, AustriaFred Hutchinson Canc Res Ctr, Howard Hughes Med Inst, Seattle, WA 98109 USA
Till, Bradley J.
[3
]
Henikoff, Steven
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Howard Hughes Med Inst, Seattle, WA 98109 USA
Fred Hutchinson Canc Res Ctr, Div Basic Sci, Seattle, WA 98109 USAFred Hutchinson Canc Res Ctr, Howard Hughes Med Inst, Seattle, WA 98109 USA
Henikoff, Steven
[1
,2
]
机构:
[1] Fred Hutchinson Canc Res Ctr, Howard Hughes Med Inst, Seattle, WA 98109 USA
[2] Fred Hutchinson Canc Res Ctr, Div Basic Sci, Seattle, WA 98109 USA
[3] IAEA, FAO, Agr & Biotechnol Lab, Seibersdorf, Austria
Mutagenesis with ethylmethanesulfonate (EMS) has been the standard for traditional genetic screens, and in recent years has been applied to reverse genetics. However, reverse-genetic strategies require maintaining a viable germline library so that mutations that are discovered can subsequently be recovered. In applying our TILLING (Targeting Induced Local Lesions IN Genomes) method to establish a Drosophila reverse-genetic service (Fly-TILL), we chose to screen the Zuker lines, a large collection of EMS-mutagenized second-and third-chromosome balanced lines that had been established for forward-genetic screening. For the past four years, our Fly-TILL service has screened this collection to provide similar to 150 allelic series of point mutations for the fly community. Our analysis of > 2000 point mutations and indels have provided a glimpse into the population dynamics of this valuable genetic resource. We found evidence for selection and differential recovery of mutations, depending on distance from balancer breakpoints. Although this process led to variable mutational densities, we have nevertheless been able to deliver potentially valuable mutations in genes selected by Fly-TILL users. We anticipate that our findings will help guide the future implementation of point-mutation resources for the Drosophila community.
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Fred Hutchinson Canc Res Ctr, Howard Hughes Med Inst, Seattle, WA 98107 USAFred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Cooper, Jennifer L.
;
Greene, Elizabeth A.
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USAFred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Greene, Elizabeth A.
;
Till, Bradley J.
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USAFred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Till, Bradley J.
;
Codomo, Christine A.
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USAFred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Codomo, Christine A.
;
Wakimoto, Barbara T.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Biol, Seattle, WA 98195 USAFred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Wakimoto, Barbara T.
;
Henikoff, Steven
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Fred Hutchinson Canc Res Ctr, Howard Hughes Med Inst, Seattle, WA 98107 USAFred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98107 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Cooper, Jennifer L.
;
Till, Bradley J.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Biol, Seattle, WA 98195 USA
Fred Hutchinson Canc Res Ctr, Seattle, WA 98107 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Till, Bradley J.
;
Laport, Robert G.
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98107 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Laport, Robert G.
;
Darlow, Margaret C.
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98107 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Darlow, Margaret C.
;
Kleffner, Justin M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Missouri, Natl Ctr Soybean Biotechnol, Div Plant Sci, Columbia, MO 65211 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Kleffner, Justin M.
;
Jamai, Aziz
论文数: 0引用数: 0
h-index: 0
机构:
So Illinois Univ, Dept Plant Soil & Agr Syst, Carbondale, IL 62901 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Jamai, Aziz
;
El-Mellouki, Tarik
论文数: 0引用数: 0
h-index: 0
机构:
So Illinois Univ, Dept Plant Soil & Agr Syst, Carbondale, IL 62901 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
El-Mellouki, Tarik
;
Liu, Shiming
论文数: 0引用数: 0
h-index: 0
机构:
So Illinois Univ, Dept Plant Soil & Agr Syst, Carbondale, IL 62901 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Liu, Shiming
;
Ritchie, Rae
论文数: 0引用数: 0
h-index: 0
机构:
Purdue Univ, USDA ARS, Crop Prod & Pest Control Res Unit, W Lafayette, IN 47907 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Ritchie, Rae
;
Nielsen, Niels
论文数: 0引用数: 0
h-index: 0
机构:
Purdue Univ, USDA ARS, Crop Prod & Pest Control Res Unit, W Lafayette, IN 47907 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Nielsen, Niels
;
Bilyeu, Kristin D.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Missouri, USDA ARS, Plant Genet Res Unit, Columbia, MO 65211 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Bilyeu, Kristin D.
;
Meksem, Khalid
论文数: 0引用数: 0
h-index: 0
机构:
So Illinois Univ, Dept Plant Soil & Agr Syst, Carbondale, IL 62901 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Meksem, Khalid
;
Comai, Luca
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Biol, Seattle, WA 98195 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Comai, Luca
;
Henikoff, Steven
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98107 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Fred Hutchinson Canc Res Ctr, Howard Hughes Med Inst, Seattle, WA 98107 USAFred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Cooper, Jennifer L.
;
Greene, Elizabeth A.
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USAFred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Greene, Elizabeth A.
;
Till, Bradley J.
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USAFred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Till, Bradley J.
;
Codomo, Christine A.
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USAFred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Codomo, Christine A.
;
Wakimoto, Barbara T.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Biol, Seattle, WA 98195 USAFred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Wakimoto, Barbara T.
;
Henikoff, Steven
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
Fred Hutchinson Canc Res Ctr, Howard Hughes Med Inst, Seattle, WA 98107 USAFred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98107 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Cooper, Jennifer L.
;
Till, Bradley J.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Biol, Seattle, WA 98195 USA
Fred Hutchinson Canc Res Ctr, Seattle, WA 98107 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Till, Bradley J.
;
Laport, Robert G.
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98107 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Laport, Robert G.
;
Darlow, Margaret C.
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98107 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Darlow, Margaret C.
;
Kleffner, Justin M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Missouri, Natl Ctr Soybean Biotechnol, Div Plant Sci, Columbia, MO 65211 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Kleffner, Justin M.
;
Jamai, Aziz
论文数: 0引用数: 0
h-index: 0
机构:
So Illinois Univ, Dept Plant Soil & Agr Syst, Carbondale, IL 62901 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Jamai, Aziz
;
El-Mellouki, Tarik
论文数: 0引用数: 0
h-index: 0
机构:
So Illinois Univ, Dept Plant Soil & Agr Syst, Carbondale, IL 62901 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
El-Mellouki, Tarik
;
Liu, Shiming
论文数: 0引用数: 0
h-index: 0
机构:
So Illinois Univ, Dept Plant Soil & Agr Syst, Carbondale, IL 62901 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Liu, Shiming
;
Ritchie, Rae
论文数: 0引用数: 0
h-index: 0
机构:
Purdue Univ, USDA ARS, Crop Prod & Pest Control Res Unit, W Lafayette, IN 47907 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Ritchie, Rae
;
Nielsen, Niels
论文数: 0引用数: 0
h-index: 0
机构:
Purdue Univ, USDA ARS, Crop Prod & Pest Control Res Unit, W Lafayette, IN 47907 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Nielsen, Niels
;
Bilyeu, Kristin D.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Missouri, USDA ARS, Plant Genet Res Unit, Columbia, MO 65211 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Bilyeu, Kristin D.
;
Meksem, Khalid
论文数: 0引用数: 0
h-index: 0
机构:
So Illinois Univ, Dept Plant Soil & Agr Syst, Carbondale, IL 62901 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Meksem, Khalid
;
Comai, Luca
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Biol, Seattle, WA 98195 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA
Comai, Luca
;
Henikoff, Steven
论文数: 0引用数: 0
h-index: 0
机构:
Fred Hutchinson Canc Res Ctr, Seattle, WA 98107 USAUniv Washington, Dept Biol, Seattle, WA 98195 USA