UmuD′2C is an error-prone DNA polymerase, Escherichia coli pol V

被引:463
作者
Tang, MJ
Shen, X
Frank, EG
O'Donnell, M
Woodgate, R
Goodman, MF
机构
[1] Univ So Calif, Dept Biol Sci, Hedco Mol Biol Labs, Los Angeles, CA 90089 USA
[2] Rockefeller Univ, New York, NY 10021 USA
[3] Howard Hughes Med Inst, New York, NY 10021 USA
[4] NICHHD, Sect DNA Replicat Repair & Mutagenesis, NIH, Bethesda, MD 20892 USA
关键词
D O I
10.1073/pnas.96.16.8919
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The damage-inducible UmuD' and UmuC proteins are required for most SOS mutagenesis in Escherichia coli, Our recent assay to reconstitute this process in vitro, using a native UmuD'C-2 complex, revealed that the highly purified preparation contained DNA polymerase activity. Here we eliminate the possibility that this activity is caused by a contaminating DNA polymerase and show that it is intrinsic to UmuD'C-2. E. coli dinB has recently been shown to have DNA polymerase activity (pol IV). We suggest that UmuD'2C, the fifth DNA polymerase discovered in E, coli, be designated as E. coli pol V. In the presence of RecA, beta sliding clamp, gamma clamp loading complex, and E. coli single-stranded binding protein (SSB), pol V's polymerase activity is highly "error prone" at both damaged and undamaged DNA template sites, catalyzing efficient bypass of abasic lesions that mould otherwise severely inhibit replication by pol III holoenzyme complex (HE), Pol V bypasses a site-directed abasic lesion with an efficiency about 100- to 150-fold higher than pol III HE. In accordance with the "A-rule," dAMP is preferentially incorporated opposite the lesion. A pol V mutant, UmuD'(2)C104 (D101N), has no measurable lesion bypass activity, A kinetic analysis shows that addition of increasing amounts of pol III to a fixed level of pol V inhibits lesion bypass, demonstrating that both enzymes compete for free 3'-OH template-primer ends. We show however, that despite competition for primer-3'-ends, pol V and pol III HE can nevertheless interact synergistically to stimulate synthesis downstream from a template lesion.
引用
收藏
页码:8919 / 8924
页数:6
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