A chemometric analysis of the resonance Raman spectra of mutant carbonmonoxy-myoglobins reveals the effects of polarity

被引:46
作者
Anderton, CL [1 ]
Hester, RE [1 ]
Moore, JN [1 ]
机构
[1] UNIV YORK,DEPT CHEM,YORK YO1 5DD,N YORKSHIRE,ENGLAND
来源
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY | 1997年 / 1338卷 / 01期
基金
英国工程与自然科学研究理事会;
关键词
resonance Raman spectroscopy; myoglobin; mutant; ligand binding; carbonmonoxy-myoglobin;
D O I
10.1016/S0167-4838(96)00194-X
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Resonance Raman spectra of 10 carbonmonoxy-myoglobins have been obtained, including sperm whale native, pig wild-type, and the mutants H64L, H64A, V68T, V68N, H64V/V68T, F43W, F46V, and L29F. This series was chosen in order to study the effect of ligand binding pocket polarity on the positions of the nu(Fe-CO) and delta(Fe-C-O) bands. Spectra of both (CO)-C-12 and (CO)-C-13 isotopic forms have been obtained and a detailed analysis has facilitated the identification of both the ligand-specific bands and six underlying polphyrin bands which are insensitive to this isotopic substitution. Along with a band-fitting analysis of infrared spectra, these resonance Raman data provide a comprehensive evaluation of the vibrations of the FeCO unit. The band positions of the ligand-specific modes are found to depend on the structure of the ligand binding pocket, arising from the strength of back-bonding within the FeCO unit, and clear correlations exist between the nu(Fe-CO), delta(Fe-C-O), and nu(C-O) band positions which characterize this synergic bonding. The results are consistent with the proposal that the vibrational band positions are determined primarily by the electrostatic potential at the ligand. Five discrete band sets are observed for this set of mutants, suggesting that 5 discrete conformations occur.
引用
收藏
页码:107 / 120
页数:14
相关论文
共 33 条
[1]   REBINDING AND RELAXATION IN THE MYOGLOBIN POCKET [J].
ANSARI, A ;
BERENDZEN, J ;
BRAUNSTEIN, D ;
COWEN, BR ;
FRAUENFELDER, H ;
HONG, MK ;
IBEN, IET ;
JOHNSON, JB ;
ORMOS, P ;
SAUKE, TB ;
SCHOLL, R ;
SCHULTE, A ;
STEINBACH, PJ ;
VITTITOW, J ;
YOUNG, RD .
BIOPHYSICAL CHEMISTRY, 1987, 26 (2-3) :337-355
[2]   RESONANCE RAMAN STUDIES OF NITRIC-OXIDE BINDING TO FERRIC AND FERROUS HEMOPROTEINS - DETECTION OF FE(III)-NO STRETCHING, FE(III)-N-O BENDING, AND FE(II)-N-O BENDING VIBRATIONS [J].
BENKO, B ;
YU, NT .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-PHYSICAL SCIENCES, 1983, 80 (22) :7042-7046
[3]   RESONANCE RAMAN-SPECTROSCOPIC STUDIES OF LIGATED MUTANT MYOGLOBINS [J].
BIRAM, D ;
HESTER, RE .
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 1994, 1204 (02) :207-216
[4]   DISTAL POCKET POLARITY IN LIGAND-BINDING TO MYOGLOBIN - DEOXY AND CARBONMONOXY FORMS OF A THREONINE(68)(E11) MUTANT INVESTIGATED BY X-RAY CRYSTALLOGRAPHY AND INFRARED-SPECTROSCOPY [J].
CAMERON, AD ;
SMERDON, SJ ;
WILKINSON, AJ ;
HABASH, J ;
HELLIWELL, JR ;
LI, TS ;
OLSON, JS .
BIOCHEMISTRY, 1993, 32 (48) :13061-13070
[5]  
CHENG XD, 1991, J MOL BIOL, V256, P1831
[6]   OUT-OF-PLANE DEFORMATION MODES IN THE RESONANCE RAMAN-SPECTRA OF METALLOPORPHYRINS AND HEME-PROTEINS [J].
CHOI, SH ;
SPIRO, TG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1983, 105 (11) :3683-3692
[7]   LOW-FREQUENCY VIBRATIONS IN RESONANCE RAMAN-SPECTRA OF HORSE HEART MYOGLOBIN - IRON-LIGAND AND IRON-NITROGEN VIBRATIONAL-MODES [J].
DESBOIS, A ;
LUTZ, M ;
BANERJEE, R .
BIOCHEMISTRY, 1979, 18 (08) :1510-1518
[8]   VIBRATIONAL ASSIGNMENTS OF THE FECO UNIT OF CO-BOUND HEME-PROTEINS REVISITED - OBSERVATION OF A NEW CO-ISOTOPE-SENSITIVE RAMAN BAND ASSIGNABLE TO THE FECO BENDING FUNDAMENTAL [J].
HIROTA, S ;
OGURA, T ;
SHINZAWAITOH, K ;
YOSHIKAWA, S ;
NAGAI, M ;
KITAGAWA, T .
JOURNAL OF PHYSICAL CHEMISTRY, 1994, 98 (26) :6652-6660
[9]   OBSERVATION OF A NEW OXYGEN-ISOTOPE-SENSITIVE RAMAN BAND FOR OXYHEMOPROTEINS AND ITS IMPLICATIONS IN HEME POCKET STRUCTURES [J].
HIROTA, S ;
OGURA, T ;
APPELMAN, EH ;
SHINZAWAITOH, K ;
YOSHIKAWA, S ;
KITAGAWA, T .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1994, 116 (23) :10564-10570
[10]   DEFORMABILITY OF HEME PROTEIN CO ADDUCTS - FT-IR ASSIGNMENT OF THE FECO BENDING MODE [J].
HU, SZ ;
VOGEL, KM ;
SPIRO, TG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1994, 116 (24) :11187-11188