Staphylococcal biofilm-forming protein has a contiguous rod-like structure

被引:61
作者
Gruszka, Dominika T. [1 ]
Wojdyla, Justyna A. [1 ]
Bingham, Richard J. [2 ]
Turkenburg, Johan P. [3 ]
Manfield, Iain W. [4 ]
Steward, Annette [5 ]
Leech, Andrew P. [1 ]
Geoghegan, Joan A. [6 ]
Foster, Timothy J. [6 ]
Clarke, Jane [5 ]
Potts, Jennifer R. [1 ,3 ]
机构
[1] Univ York, Dept Biol, York YO10 5DD, N Yorkshire, England
[2] Univ Huddersfield, Dept Chem & Biol Sci, Huddersfield HD1 3DH, W Yorkshire, England
[3] Univ York, Dept Chem, York YO10 5DD, N Yorkshire, England
[4] Univ Leeds, Fac Biol Sci, Astbury Ctr Struct Mol Biol, Leeds LS2 9JT, W Yorkshire, England
[5] Univ Cambridge, Dept Chem, Cambridge CB2 1EW, England
[6] Trinity Coll Dublin, Moyne Inst Prevent Med, Dept Microbiol, Dublin 2, Ireland
基金
英国生物技术与生命科学研究理事会; 爱尔兰科学基金会; 英国惠康基金;
关键词
device infection; protein biophysics; X-ray crystallography; protein domains; RAY-DIFFRACTION DATA; CRYSTAL-STRUCTURE; EPIDERMIDIS; ACCUMULATION; MODEL; SOFTWARE; SASG; DICTIONARY; ADHERENCE; SURFACES;
D O I
10.1073/pnas.1119456109
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Staphylococcus aureus and Staphylococcus epidermidis form communities (called biofilms) on inserted medical devices, leading to infections that affect many millions of patients worldwide and cause substantial morbidity and mortality. As biofilms are resistant to antibiotics, device removal is often required to resolve the infection. Thus, there is a need for new therapeutic strategies and molecular data that might assist their development. Surface proteins S. aureus surface protein G (SasG) and accumulation-associated protein (S. epidermidis) promote biofilm formation through their "B" regions. B regions contain tandemly arrayed G5 domains interspersed with approximately 50 residue sequences (herein called E) and have been proposed to mediate intercellular accumulation through Zn2+-mediated homodimerization. Although E regions are predicted to be unstructured, SasG and accumulation-associated protein form extended fibrils on the bacterial surface. Here we report structures of E-G5 and G5-E-G5 from SasG and biophysical characteristics of single and multidomain fragments. E sequences fold cooperatively and form interlocking interfaces with G5 domains in a head-to-tail fashion, resulting in a contiguous, elongated, monomeric structure. E and G5 domains lack a compact hydrophobic core, and yet G5 domain and multidomain constructs have thermodynamic stabilities only slightly lower than globular proteins of similar size. Zn2+ does not cause SasG domains to form dimers. The work reveals a paradigm for formation of fibrils on the 100-nm scale and suggests that biofilm accumulation occurs through a mechanism distinct from the "zinc zipper." Finally, formation of two domains by each repeat (as in SasG) might reduce misfolding in proteins when the tandem arrangement of highly similar sequences is advantageous.
引用
收藏
页码:E1011 / E1018
页数:8
相关论文
共 66 条
  • [1] PHENIX: a comprehensive Python']Python-based system for macromolecular structure solution
    Adams, Paul D.
    Afonine, Pavel V.
    Bunkoczi, Gabor
    Chen, Vincent B.
    Davis, Ian W.
    Echols, Nathaniel
    Headd, Jeffrey J.
    Hung, Li-Wei
    Kapral, Gary J.
    Grosse-Kunstleve, Ralf W.
    McCoy, Airlie J.
    Moriarty, Nigel W.
    Oeffner, Robert
    Read, Randy J.
    Richardson, David C.
    Richardson, Jane S.
    Terwilliger, Thomas C.
    Zwart, Peter H.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 : 213 - 221
  • [2] Allegranzi B., 2011, Report on the burden of endemic health care-associated infection worldwide
  • [3] Thin aggregative fimbriae enhance Salmonella enteritidis biofilm formation
    Austin, JW
    Sanders, G
    Kay, WW
    Collinson, SK
    [J]. FEMS MICROBIOLOGY LETTERS, 1998, 162 (02) : 295 - 301
  • [4] THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY
    BAILEY, S
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 : 760 - 763
  • [5] Localized tufts of fibrils on Staphylococcus epidermidis NCTC 11047 are comprised of the accumulation-associated protein
    Banner, Miriam A.
    Cunniffe, John G.
    Macintosh, Robin L.
    Foster, Timothy J.
    Rohde, Holger
    Mack, Dietrich
    Hoyes, Emmy
    Derrick, Jeremy
    Upton, Mathew
    Handley, Pauline S.
    [J]. JOURNAL OF BACTERIOLOGY, 2007, 189 (07) : 2793 - 2804
  • [6] Bateman A, 2004, NUCLEIC ACIDS RES, V32, pD138, DOI [10.1093/nar/gkp985, 10.1093/nar/gkh121, 10.1093/nar/gkr1065]
  • [7] The G5 domain: a potential N-acetylglucosamine recognition domain involved in biofilm formation
    Bateman, A
    Holden, MTG
    Yeats, C
    [J]. BIOINFORMATICS, 2005, 21 (08) : 1301 - 1303
  • [8] Single-molecule fluorescence reveals sequence-specific misfolding in multidomain proteins
    Borgia, Madeleine B.
    Borgia, Alessandro
    Best, Robert B.
    Steward, Annette
    Nettels, Daniel
    Wunderlich, Bengt
    Schuler, Benjamin
    Clarke, Jane
    [J]. NATURE, 2011, 474 (7353) : 662 - U142
  • [9] Health care-associated infections in the neonatal intensive care unit
    Brady, MT
    [J]. AMERICAN JOURNAL OF INFECTION CONTROL, 2005, 33 (05) : 268 - 275
  • [10] A zinc-dependent adhesion module is responsible for intercellular adhesion in staphylococcal biofilms
    Conrady, Deborah G.
    Brescia, Cristin C.
    Horii, Katsunori
    Weiss, Alison A.
    Hassett, Daniel J.
    Herr, Andrew B.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (49) : 19456 - 19461