Bioinformatics in proteomics

被引:37
作者
Vihinen, M [1 ]
机构
[1] Univ Tampere, Inst Med Technol, FIN-33014 Tampere, Finland
[2] Tampere Univ Hosp, FIN-33520 Tampere, Finland
来源
BIOMOLECULAR ENGINEERING | 2001年 / 18卷 / 05期
基金
芬兰科学院;
关键词
bioinformatics; proteomics; post-genomic era; two-dimensional electrophoresis (2-DE);
D O I
10.1016/S1389-0344(01)00099-5
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Several genome sequencing projects have recently been completed and the majority of human coding regions have been sequenced. In the next step many of the further studies will concentrate on proteins. Proteomics methods are essential for studying protein expression. activity, regulation and modifications. Bioinformatics is an integral part of proteomics research. The recent developments and applications in proteomics are discussed including mass spectrometry data analysis and interpretation, analysis and storage of the get images to databases, gel comparison, and advanced methods to study e.g. protein co-expression, protein-protein interactions, as well as metabolic and cellular pathways. The significance of informatics in proteomics will gradually increase because of the advent of high-throughput methods relying on powerful data analysis. (C) 2001 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:241 / 248
页数:8
相关论文
共 47 条
[1]  
Alaiya AA, 2000, ELECTROPHORESIS, V21, P1210, DOI 10.1002/(SICI)1522-2683(20000401)21:6<1210::AID-ELPS1210>3.3.CO
[2]  
2-J
[3]   A comparison of selected mRNA and protein abundances in human liver [J].
Anderson, L ;
Seilhamer, J .
ELECTROPHORESIS, 1997, 18 (3-4) :533-537
[4]   First steps from a two-dimensional protein index towards a response-regulation map for Bacillus subtilis [J].
Antelmann, H ;
Bernhardt, J ;
Schmid, R ;
Mach, H ;
Volker, U ;
Hecker, M .
ELECTROPHORESIS, 1997, 18 (08) :1451-1463
[5]   Federated two-dimensional electrophoresis database: Simple means of publishing two-dimensional electrophoresis data [J].
Appel, RD ;
Bairoch, A ;
Sanchez, JC ;
Vargas, JR ;
Golaz, O ;
Pasquali, C ;
Hochstrasser, DF .
ELECTROPHORESIS, 1996, 17 (03) :540-546
[6]  
Cash P, 2000, ELECTROPHORESIS, V21, P1187, DOI 10.1002/(SICI)1522-2683(20000401)21:6<1187::AID-ELPS1187>3.0.CO
[7]  
2-F
[8]   Human and mouse proteomic databases: novel resources in the protein universe [J].
Celis, JE ;
Ostergaard, M ;
Jensen, NA ;
Gromova, I ;
Rasmussen, HH ;
Gromov, P .
FEBS LETTERS, 1998, 430 (1-2) :64-72
[9]  
Christendat D, 2000, NAT STRUCT BIOL, V7, P903
[10]  
Deiwick J, 1999, ELECTROPHORESIS, V20, P813, DOI 10.1002/(SICI)1522-2683(19990101)20:4/5<813::AID-ELPS813>3.0.CO