FINDNCS:: a program to detect non-crystallographic symmetries in protein crystals from heavy-atom sites

被引:51
作者
Lu, GG [1 ]
机构
[1] Karolinska Inst, Dept Med Biochem & Biophys, Div Mol Struct Biol, S-17177 Stockholm, Sweden
关键词
D O I
10.1107/S0021889898015052
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
In order to facilitate applications of averaging techniques in the MIR/MAD procedure, a program, FINDNCS, which automatically identifies non-crystallographic symmetry (NCS) from heavy-atom sites, has been developed. The program outputs the NCS operations (a rotation matrix and a translation vector), the corresponding root-mean-square (r.m.s) deviations of heavy-atom sites, polar angles and screw translations, and writes coordinates of matching sites in Protein Data Bank (PDB) format. The program has an interface with the graphics program O [Jones ct al. (1991). Acta Cryst. A47, 110-119] so that the NCS operations can be displayed automatically. In the test examples, all the correct NCS operations were identified and were above the noise solutions.
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页码:365 / 368
页数:4
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