Dasty2, an ajax protein DAS client

被引：19

作者：

Jimenez, Rafael C. ^{[1
,2
]}

Quinn, Antony F. ^{[1
]}

Garcia, Alexander ^{[3
]}

Labarga, Alberto ^{[4
]}

O'Neill, Kieran ^{[1
,2
]}

Martinez, Fernando ^{[2
]}

Salazar, Gustavo A. ^{[2
]}

Hermjakob, Henning ^{[1
]}

机构：

[1] EMBL EBI, Proteom Serv Team, Cambridge CB10 1SD, England

[2] Natl Bioinformat Network, NBN Cent, Cape Town, South Africa

[3] Univ Bremen, Fac Linguist & Literary Sci, Bremen, Germany

[4] Integromics SL, Madrid, Spain

来源：

BIOINFORMATICS | 2008年 / 24卷 / 18期

关键词：

D O I：

10.1093/bioinformatics/btn387

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Dasty2 is a highly interactive web client integrating protein sequence annotations from currently more than 40 sources, using the distributed annotation system (DAS).

引用

页码：2119 / 2121

页数：3

共 10 条

[1]

Apweiler R, 2004, NUCLEIC ACIDS RES, V32, pD115, DOI [10.1093/nar/gkh131, 10.1093/nar/gkw1099]

[2] Improved prediction of signal peptides: SignalP 3.0 [J].

Bendtsen, JD ;

Nielsen, H ;

von Heijne, G ;

Brunak, S .

JOURNAL OF MOLECULAR BIOLOGY, 2004, 340 (04) :783-795

[3] The Distributed Annotation System [J].

Dowell, Robin D. ;

Jokerst, Rodney M. ;

Day, Allen ;

Eddy, Sean R. ;

Stein, Lincoln .

BMC BIOINFORMATICS, 2001, 2 (1)

[4] Ensembl 2008 [J].

Flicek, P. ;

Aken, B. L. ;

Beal, K. ;

Ballester, B. ;

Caccamo, M. ;

Chen, Y. ;

Clarke, L. ;

Coates, G. ;

Cunningham, F. ;

Cutts, T. ;

Down, T. ;

Dyer, S. C. ;

Eyre, T. ;

Fitzgerald, S. ;

Fernandez-Banet, J. ;

Graf, S. ;

Haider, S. ;

Hammond, M. ;

Holland, R. ;

Howe, K. L. ;

Howe, K. ;

Johnson, N. ;

Jenkinson, A. ;

Kahari, A. ;

Keefe, D. ;

Kokocinski, F. ;

Kulesha, E. ;

Lawson, D. ;

Longden, I. ;

Megy, K. ;

Meidl, P. ;

Overduin, B. ;

Parker, A. ;

Pritchard, B. ;

Prlic, A. ;

Rice, S. ;

Rios, D. ;

Schuster, M. ;

Sealy, I. ;

Slater, G. ;

Smedley, D. ;

Spudich, G. ;

Trevanion, S. ;

Vilella, A. J. ;

Vogel, J. ;

White, S. ;

Wood, M. ;

Birney, E. ;

Cox, T. ;

Curwen, V. .

NUCLEIC ACIDS RESEARCH, 2008, 36 :D707-D714

[5]

Garrett JJ, 2005, Ajax: a new approach to web applications

[6] Dasty and UniProt DAS: a perfect pair for protein feature visualization [J].

Jones, P ;

Vinod, N ;

Down, T ;

Hackmann, A ;

Kahari, A ;

Kretschmann, E ;

Quinn, A ;

Wieser, D ;

Hermjakob, H ;

Apweiler, R .

BIOINFORMATICS, 2005, 21 (14) :3198-3199

[7]

ONEILL K, 2007, ISMB 2007

[8] Adding some SPICE to DAS [J].

Prlic, A ;

Down, TA ;

Hubbard, TJP .

BIOINFORMATICS, 2005, 21 :40-41

[9] Integrating sequence and structural biology with DAS [J].

Prlic, Andreas ;

Down, Thomas A. ;

Kulesha, Eugene ;

Finn, Robert D. ;

Kaehaeri, Andreas ;

Hubbard, Tim J. P. .

BMC BIOINFORMATICS, 2007, 8 (1)

[10]

VALENCIA A, 2005, EUR J HUM GENET, V13, P994

← 1 →