Electron transfer precedes ATP hydrolysis during nitrogenase catalysis

被引:83
作者
Duval, Simon [1 ]
Danyal, Karamatullah [1 ]
Shaw, Sudipta [1 ]
Lytle, Anna K. [1 ]
Dean, Dennis R. [2 ]
Hoffman, Brian M. [3 ]
Antony, Edwin [1 ]
Seefeldt, Lance C. [1 ]
机构
[1] Utah State Univ, Dept Chem & Biochem, Logan, UT 84322 USA
[2] Virginia Polytech Inst & State Univ, Dept Biochem, Blacksburg, VA 24061 USA
[3] Northwestern Univ, Dept Chem, Evanston, IL 60208 USA
基金
美国国家卫生研究院;
关键词
nitrogen fixation; metalloprotein; MOLYBDENUM-IRON PROTEIN; KLEBSIELLA-PNEUMONIAE NITROGENASE; AZOTOBACTER-VINELANDII NITROGENASE; MOFE-PROTEIN; FEMO-COFACTOR; ENERGY TRANSDUCTION; SUBSTRATE REDUCTION; HYDROGEN EVOLUTION; ABC TRANSPORTERS; METAL CENTERS;
D O I
10.1073/pnas.1311218110
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The biological reduction of N-2 to NH3 catalyzed by Mo-dependent nitrogenase requires at least eight rounds of a complex cycle of events associated with ATP-driven electron transfer (ET) from the Fe protein to the catalytic MoFe protein, with each ET coupled to the hydrolysis of two ATP molecules. Although steps within this cycle have been studied for decades, the nature of the coupling between ATP hydrolysis and ET, in particular the order of ET and ATP hydrolysis, has been elusive. Here, we have measured first-order rate constants for each key step in the reaction sequence, including direct measurement of the ATP hydrolysis rate constant: k(ATP) = 70 s(-1), 25 degrees C. Comparison of the rate constants establishes that the reaction sequence involves four sequential steps: (i) conformationally gated ET (k(ET) = 140 s(-1), 25 C), (ii) ATP hydrolysis (k(ATP) = 70 s(-1), 25 degrees C), (iii) Phosphate release (k(Pi) = 16 s(-1), 25 degrees C), and (iv) Fe protein dissociation from the MoFe protein (k(diss) = 6 s(-1), 25 degrees C). These findings allow completion of the thermodynamic cycle undergone by the Fe protein, showing that the energy of ATP binding and protein-protein association drive ET, with subsequent ATP hydrolysis and Pi release causing dissociation of the complex between the Fe-ox(ADP)(2) protein and the reduced MoFe protein.
引用
收藏
页码:16414 / 16419
页数:6
相关论文
共 36 条
[1]   DIRECT, REAL-TIME MEASUREMENT OF RAPID INORGANIC-PHOSPHATE RELEASE USING A NOVEL FLUORESCENT-PROBE AND ITS APPLICATION TO ACTOMYOSIN SUBFRAGMENT-1 ATPASE [J].
BRUNE, M ;
HUNTER, JL ;
CORRIE, JET ;
WEBB, MR .
BIOCHEMISTRY, 1994, 33 (27) :8262-8271
[2]   Mechanism of molybdenum nitrogenase [J].
Burgess, BK ;
Lowe, DJ .
CHEMICAL REVIEWS, 1996, 96 (07) :2983-3011
[3]   LARGE-SCALE PURIFICATION OF HIGH-ACTIVITY AZOTOBACTER-VINELANDII NITROGENASE [J].
BURGESS, BK ;
JACOBS, DB ;
STIEFEL, EI .
BIOCHIMICA ET BIOPHYSICA ACTA, 1980, 614 (01) :196-209
[4]   THE NITROGENASE FEMO-COFACTOR AND P-CLUSTER PAIR - 2.2-ANGSTROM RESOLUTION STRUCTURES [J].
CHAN, MK ;
KIM, JS ;
REES, DC .
SCIENCE, 1993, 260 (5109) :792-794
[5]   Catalytic and biophysical properties of a nitrogenase apo-MoFe protein produced by a nifB-deletion mutant of Azotobacter vinelandii [J].
Christiansen, J ;
Goodwin, PJ ;
Lanzilotta, WN ;
Seefeldt, LC ;
Dean, DR .
BIOCHEMISTRY, 1998, 37 (36) :12611-12623
[6]   Electron Transfer within Nitrogenase: Evidence for a Deficit-Spending Mechanism [J].
Danyal, Karamatullah ;
Dean, Dennis R. ;
Hoffman, Brian M. ;
Seefeldt, Lance C. .
BIOCHEMISTRY, 2011, 50 (43) :9255-9263
[7]   Conformational Gating of Electron Transfer from the Nitrogenase Fe Protein to MoFe Protein [J].
Danyal, Karamatullah ;
Mayweather, Diana ;
Dean, Dennis R. ;
Seefeldt, Lance C. ;
Hoffman, Brian M. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2010, 132 (20) :6894-+
[8]   NITROGENASE OF KLEBSIELLA-PNEUMONIAE - PRE-STEADY STATE BURST OF ATP HYDROLYSIS IS COUPLED TO ELECTRON-TRANSFER BETWEEN COMPONENT PROTEINS [J].
EADY, RR ;
LOWE, DJ ;
THORNELEY, RNF .
FEBS LETTERS, 1978, 95 (02) :211-213
[9]   Nitrogenase MoFe-protein at 1.16 Å resolution:: A central ligand in the FeMo-cofactor [J].
Einsle, O ;
Tezcan, FA ;
Andrade, SLA ;
Schmid, B ;
Yoshida, M ;
Howard, JB ;
Rees, DC .
SCIENCE, 2002, 297 (5587) :1696-1700
[10]   KLEBSIELLA-PNEUMONIAE NITROGENASE - THE PRE-STEADY-STATE KINETICS OF MOFE-PROTEIN REDUCTION AND HYDROGEN EVOLUTION UNDER CONDITIONS OF LIMITING ELECTRON FLUX SHOW THAT THE RATES OF ASSOCIATION WITH THE FE-PROTEIN AND ELECTRON-TRANSFER ARE INDEPENDENT OF THE OXIDATION LEVEL OF THE MOFE-PROTEIN [J].
FISHER, K ;
LOWE, DJ ;
THORNELEY, RNF .
BIOCHEMICAL JOURNAL, 1991, 279 :81-85