Identification and gene structure of a novel human PLZF-related transcription factor gene, TZFP

被引:24
作者
Lin, WC [1 ]
Lai, CH
Tang, CJC
Huang, CJ
Tang, TK
机构
[1] Acad Sinica, Inst Biomed Sci, Taipei 115, Taiwan
[2] Acad Sinica, Inst Biol Chem, Taipei 115, Taiwan
关键词
bioinformatics; zinc finger protein; testis-specific expression;
D O I
10.1006/bbrc.1999.1594
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A novel cDNA clone was identified through yeast two-hybrid experiments. Following cross-examination between the cDNA clones, EST clones, and the cosmid clone, we could digitally assemble a new zinc finger transcription factor gene. This predicted gene has a cDNA size of about 1960 bp and is translated into a 487-amino-acid protein. According to database analysis, this gene contains three C2H2 zinc finger motifs and is highly related to human PLZF (promyelocytic leukemia zinc finger protein). The full-length coding region of the gene was isolated, and its sequences were confirmed by DNA sequencing. Interestingly, one splicing variant lacking exon III was also identified. Northern blot analysis revealed that this gene is mainly expressed in human testis. In conclusion, we have identified a new member of the PLZF zinc finger protein family, the testis zinc finger protein (TZFP), which is mainly expressed in testis tissue. (C) 1999 Academic Press.
引用
收藏
页码:789 / 795
页数:7
相关论文
共 21 条
  • [1] COMPLEMENTARY-DNA SEQUENCING - EXPRESSED SEQUENCE TAGS AND HUMAN GENOME PROJECT
    ADAMS, MD
    KELLEY, JM
    GOCAYNE, JD
    DUBNICK, M
    POLYMEROPOULOS, MH
    XIAO, H
    MERRIL, CR
    WU, A
    OLDE, B
    MORENO, RF
    KERLAVAGE, AR
    MCCOMBIE, WR
    VENTER, JC
    [J]. SCIENCE, 1991, 252 (5013) : 1651 - 1656
  • [2] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    Altschul, SF
    Madden, TL
    Schaffer, AA
    Zhang, JH
    Zhang, Z
    Miller, W
    Lipman, DJ
    [J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (17) : 3389 - 3402
  • [3] AVANTAGGIATO V, 1995, J NEUROSCI, V15, P4927
  • [4] Analysis of EST-driven gene annotation in human genomic sequence
    Bailey, LC
    Searls, DB
    Overton, GC
    [J]. GENOME RESEARCH, 1998, 8 (04): : 362 - 376
  • [5] Prediction of complete gene structures in human genomic DNA
    Burge, C
    Karlin, S
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1997, 268 (01) : 78 - 94
  • [6] REARRANGEMENTS OF THE RETINOIC ACID RECEPTOR-ALPHA AND PROMYELOCYTIC LEUKEMIA ZINC-FINGER GENES RESULTING FROM T(11 17)(Q23 Q21) IN A PATIENT WITH ACUTE PROMYELOCYTIC LEUKEMIA
    CHEN, SJ
    ZELENT, A
    TONG, JH
    YU, HQ
    WANG, ZY
    DERRE, J
    BERGER, R
    WAXMAN, S
    CHEN, Z
    [J]. JOURNAL OF CLINICAL INVESTIGATION, 1993, 91 (05) : 2260 - 2267
  • [7] FUSION BETWEEN A NOVEL KRUPPEL-LIKE ZINC FINGER GENE AND THE RETINOIC ACID RECEPTOR-ALPHA LOCUS DUE TO A VARIANT T(11,17) TRANSLOCATION ASSOCIATED WITH ACUTE PROMYELOCYTIC LEUKEMIA
    CHEN, Z
    BRAND, NJ
    CHEN, A
    CHEN, SJ
    TONG, JH
    WANG, ZY
    WAXMAN, S
    ZELENT, A
    [J]. EMBO JOURNAL, 1993, 12 (03) : 1161 - 1167
  • [8] EXPRESSION OF THE ZINC-FINGER GENE PLZF AT RHOMBOMERE BOUNDARIES IN THE VERTEBRATE HINDBRAIN
    COOK, M
    GOULD, A
    BRAND, N
    DAVIES, J
    STRUTT, P
    SHAKNOVICH, R
    LICHT, J
    WAXMAN, S
    CHEN, Z
    GLUECKSOHNWAELSCH, S
    KRUMLAUF, R
    ZELENT, A
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (06) : 2249 - 2253
  • [9] Histone deacetylase associated with mSin3A mediates repression by the acute promyelocytic leukemia-associated PLZF protein
    David, G
    Alland, L
    Hong, SH
    Wong, CW
    DePinho, RA
    Dejean, A
    [J]. ONCOGENE, 1998, 16 (19) : 2549 - 2556
  • [10] Amino-terminal protein-protein interaction motif (POZ-domain) is responsible for activities of the promyelocytic leukemia zinc finger retinoic acid receptor alpha fusion protein
    Dong, S
    Zhu, J
    Reid, A
    Strutt, P
    Guidez, F
    Zhong, HJ
    Wang, ZY
    Licht, J
    Waxman, S
    Chomienne, C
    Chen, Z
    Zelent, A
    Chen, SJ
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (08) : 3624 - 3629