DNA relatedness among the pathovars of Pseudomonas syringae and description of Pseudomonas tremae sp. nov. and Pseudomonas cannabina sp. nov. (ex Sutic and Dowson 1959)

被引:308
作者
Gardan, L
Shafik, H
Belouin, S
Broch, R
Grimont, F
Grimont, PAD
机构
[1] INRA Pathol Vegetale & Phytobacte, F-49071 Beaucouze, France
[2] Inst Pasteur, INSERM, Unite Enterobacteries, U389, F-75724 Paris, France
来源
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY | 1999年 / 49卷
关键词
Pseudomonas syringae; taxonomy; ribotyping; DNA-DNA hybridization;
D O I
10.1099/00207713-49-2-469
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A total of 48 pathovars of Pseudomonas syringae and eight related species were studied by DNA-DNA hybridization (S1 nuclease method) and ribotyping. The existence of nine discrete genomospecies was indicated. Genomospecies 1 corresponded to P. syringae sensu stricto and included P. syringae pathovars syringae, aptata, lapsa, papulans, pisi, atrofaciens, aceris, panici, dysoxyli and japonica. Genomospecies 2 included P. syringae pathovars phaseolicola, ulmi, mori, lachrymans, sesami, tabaci, morsprunorum, glycinea, ciccaronei, eriobotryae, mellea, aesculi, hibisci, myricae, photiniae and dendropanacis and nomenspecies Pseudomonas savastanoi, Pseudomonas ficuserectae, Pseudomonas meliae and Pseudomonas amygdali, which are thus synonymous. P. amygdali is the earliest valid name for this genomospecies. Genomospecies 3 included P. syringae pathovars tomato, persicae, antirrhini, maculicola, viburni, berberidis, apii, delphinii, passiflorae, philadelphi, ribicola and primulae. We recommend strain CFBP 2212 of P. syringae pv. tomato to serve as the type strain. Genomospecies 4 included 'Pseudomonas coronafaciens' and P. syringae pathovars porri, garcae, striafaciens, atropurpurea, oryzae and zizaniae and corresponds to 'P. coronafaciens'. Genomospecies 5 included P. syringae pv. tremae and corresponds to Pseudomonas tremae sp. nov. Genomospecies 6 included Pseudomonas viridiflava and the presently misidentified pathotype strains of P. syringae pv. ribicola and P. syringae pv. primulae and thus corresponds to P. viridiflava. Genomospecies 7 included P. syringae pv. tagetis and P. syringae pv. helianthi. We recommend strain CFBP 1694 of P. syringae pv. tagetis to serve as a reference strain. Genomospecies 8 included P. syringae pv. theae and Pseudomonas avellanae and thus corresponds to P. avellanae. Genomospecies 9 included P. syringae pv. cannabina and corresponds to Pseudomonas cannabina sp. nov. Ribotyping (SmaI and HincII endonucleases) could separate seven of the nine genomospecies. The unnamed genomospecies 3 and 7 will be named when phenotypic data are available for identification. Two species are described,P. tremae sp. nov. and P, cannabina sp. nov. Other species will be named when phenotypic data are available for identification.
引用
收藏
页码:469 / 478
页数:10
相关论文
共 30 条
[1]  
BRADBURY JF, 1986, GUIDE PLANT PATHOGEN, P110
[2]   ESCHERICHIA-VULNERIS - A NEW SPECIES OF ENTEROBACTERIACEAE ASSOCIATED WITH HUMAN WOUNDS [J].
BRENNER, DJ ;
MCWHORTER, AC ;
KNUTSON, JKL ;
STEIGERWALT, AG .
JOURNAL OF CLINICAL MICROBIOLOGY, 1982, 15 (06) :1133-1140
[3]   Taxonomic diversity of pseudomonads revealed by computer-interpretation of ribotyping data [J].
Brosch, R ;
Lefevre, M ;
Grimont, F ;
Grimont, PAD .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 1996, 19 (04) :541-555
[4]   USE OF A SINGLE-STRAND SPECIFIC NUCLEASE FOR ANALYSIS OF BACTERIAL AND PLASMID DEOXYRIBONUCLEIC ACID HOMODUPLEXES AND HETERODUPLEXES [J].
CROSA, JH ;
BRENNER, DJ ;
FALKOW, S .
JOURNAL OF BACTERIOLOGY, 1973, 115 (03) :904-911
[5]  
DENNY TP, 1988, J GEN MICROBIOL, V134, P1939
[6]   RIBOSOMAL RIBONUCLEIC-ACID CISTRON SIMILARITIES OF PHYTOPATHOGENIC PSEUDOMONAS SPECIES [J].
DEVOS, P ;
GOOR, M ;
GILLIS, M ;
DELEY, J .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1985, 35 (02) :169-184
[7]  
Doudoroff M., 1974, BERGEYS MANUAL DETER, V8th, P217
[8]  
Dye D. W., 1980, Review of Plant Pathology, V59, P153
[9]   DNA RELATEDNESS AMONG THE PATHOVAR STRAINS OF PSEUDOMONAS-SYRINGAE SUBSP SAVASTANOI JANSE (1982) AND PROPOSAL OF PSEUDOMONAS-SAVASTANOI SP-NOV [J].
GARDAN, L ;
BOLLET, C ;
ABUGHORRAH, M ;
GRIMONT, F ;
GRIMONT, PAD .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1992, 42 (04) :606-612
[10]   PHENOTYPIC HETEROGENEITY OF PSEUDOMONAS-SYRINGAE VANHALL [J].
GARDAN, L ;
COTTIN, S ;
BOLLET, C ;
HUNAULT, G .
RESEARCH IN MICROBIOLOGY, 1991, 142 (09) :995-1003