DNA methylation dynamics during the mammalian life cycle

被引:235
作者
Hackett, Jamie A. [1 ]
Surani, M. Azim [1 ]
机构
[1] Univ Cambridge, Wellcome Trust Canc Res UK Gurdon Inst, Cambridge CB2 1QN, England
关键词
epigenetics; DNA methylation; reprogramming; PGC; bisulphite; EMBRYONIC STEM-CELLS; DE-NOVO METHYLATION; HIGH-THROUGHPUT; GERM-CELLS; EPIGENETIC INHERITANCE; CYTOSINE METHYLATION; PATERNAL GENOME; CPG METHYLATION; 5-HYDROXYMETHYLCYTOSINE; DEMETHYLATION;
D O I
10.1098/rstb.2011.0328
中图分类号
Q [生物科学];
学科分类号
090105 [作物生产系统与生态工程];
摘要
DNA methylation is dynamically remodelled during the mammalian life cycle through distinct phases of reprogramming and de novo methylation. These events enable the acquisition of cellular potential followed by the maintenance of lineage-restricted cell identity, respectively, a process that defines the life cycle through successive generations. DNA methylation contributes to the epigenetic regulation of many key developmental processes including genomic imprinting, X-inactivation, genome stability and gene regulation. Emerging sequencing technologies have led to recent insights into the dynamic distribution of DNA methylation during development and the role of this epigenetic mark within distinct genomic contexts, such as at promoters, exons or imprinted control regions. Additionally, there is a better understanding of the mechanistic basis of DNA demethylation during epigenetic reprogramming in primordial germ cells and during pre-implantation development. Here, we discuss our current understanding of the developmental roles and dynamics of this key epigenetic system.
引用
收藏
页数:8
相关论文
共 98 条
[1]
Genomic imprinting: recognition and marking of imprinted loci [J].
Abramowitz, Lara K. ;
Bartolomei, Marisa S. .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2012, 22 (02) :72-78
[2]
A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice [J].
Aravin, Alexei A. ;
Sachidanandam, Ravi ;
Bourc'his, Deborah ;
Schaefer, Christopher ;
Pezic, Dubravka ;
Toth, Katalin Fejes ;
Bestor, Timothy ;
Hannon, Gregory J. .
MOLECULAR CELL, 2008, 31 (06) :785-799
[3]
Acute Exercise Remodels Promoter Methylation in Human Skeletal Muscle [J].
Barres, Romain ;
Yan, Jie ;
Egan, Brendan ;
Treebak, Jonas Thue ;
Rasmussen, Morten ;
Fritz, Tomas ;
Caidahl, Kenneth ;
Krook, Anna ;
O'Gorman, Donal J. ;
Zierath, Juleen R. .
CELL METABOLISM, 2012, 15 (03) :405-411
[4]
Genomic imprinting: employing and avoiding epigenetic processes [J].
Bartolomei, Marisa S. .
GENES & DEVELOPMENT, 2009, 23 (18) :2124-2133
[5]
High-throughput DNA methylation profiling using universal bead arrays [J].
Bibikova, M ;
Lin, ZW ;
Zhou, LX ;
Chudin, E ;
Garcia, EW ;
Wu, B ;
Doucet, D ;
Thomas, NJ ;
Wang, YH ;
Vollmer, E ;
Goldmann, T ;
Seifart, C ;
Jiang, W ;
Barker, DL ;
Chee, MS ;
Floros, J ;
Fan, JB .
GENOME RESEARCH, 2006, 16 (03) :383-393
[6]
DNA methylation patterns and epigenetic memory [J].
Bird, A .
GENES & DEVELOPMENT, 2002, 16 (01) :6-21
[7]
Quantitative Sequencing of 5-Methylcytosine and 5-Hydroxymethylcytosine at Single-Base Resolution [J].
Booth, Michael J. ;
Branco, Miguel R. ;
Ficz, Gabriella ;
Oxley, David ;
Krueger, Felix ;
Reik, Wolf ;
Balasubramanian, Shankar .
SCIENCE, 2012, 336 (6083) :934-937
[8]
Targets and dynamics of promoter DNA methylation during early mouse development [J].
Borgel, Julie ;
Guibert, Sylvain ;
Li, Yufeng ;
Chiba, Hatsune ;
Schuebeler, Dirk ;
Sasaki, Hiroyuki ;
Forne, Thierry ;
Weber, Michael .
NATURE GENETICS, 2010, 42 (12) :1093-U90
[9]
Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L [J].
Bourc'his, D ;
Bestor, TH .
NATURE, 2004, 431 (7004) :96-99
[10]
Uncovering the role of 5-hydroxymethylcytosine in the epigenome [J].
Branco, Miguel R. ;
Ficz, Gabriella ;
Reik, Wolf .
NATURE REVIEWS GENETICS, 2012, 13 (01) :7-13