Detection of large scale 3′ deletions in the PMS2 gene amongst Colon-CFR participants: have we been missing anything?

被引:12
作者
Clendenning, Mark [1 ]
Walsh, Michael D. [1 ]
Gelpi, Judith Balmana [2 ]
Thibodeau, Stephen N. [3 ]
Lindor, Noralane [4 ]
Potter, John D. [5 ,6 ]
Newcomb, Polly [5 ]
LeMarchand, Loic [7 ]
Haile, Robert [8 ]
Gallinger, Steve [9 ]
Hopper, John L. [10 ]
Jenkins, Mark A. [10 ]
Rosty, Christophe [1 ,11 ]
Young, Joanne P. [1 ]
Buchanan, Daniel D. [1 ]
机构
[1] Queensland Inst Med Res, Herston, Qld 4006, Australia
[2] Hosp Valle De Hebron, Dept Med Oncol, Canc Prevent Unit, Barcelona, Spain
[3] Mayo Clin, Dept Lab Med & Pathol, Rochester, MN USA
[4] Mayo Clin Arizona, Dept Hlth Sci Res, Scottsdale, AZ USA
[5] Fred Hutchinson Canc Res Ctr, Canc Prevent Program, Seattle, WA 98104 USA
[6] Massey Univ, Ctr Publ Hlth Res, Wellington, New Zealand
[7] Univ Hawaii Manoa, Canc Res Ctr Hawaii, Honolulu, HI 96822 USA
[8] Univ So Calif, Keck Sch Med, Los Angeles, CA 90033 USA
[9] Canc Care Ontario, Toronto, ON, Canada
[10] Univ Melbourne, Melbourne Sch Populat Hlth, Ctr Mol Environm Genet & Analyt Epidemiol, Parkville, Vic 3052, Australia
[11] Univ Queensland, Sch Med, Herston, Qld, Australia
基金
美国国家卫生研究院;
关键词
Lynch syndrome; PMS2; Germline testing; Large deletions; Pseudogenes; Colorectal cancer; MUTATION DETECTION; LYNCH-SYNDROME; CANCER; QUANTIFICATION; AVOIDANCE;
D O I
10.1007/s10689-012-9597-4
中图分类号
R73 [肿瘤学];
学科分类号
100214 [肿瘤学];
摘要
Current screening practices have been able to identify PMS2 mutations in 78 % of cases of colorectal cancer from the Colorectal Cancer Family Registry (Colon CFR) which showed solitary loss of the PMS2 protein. However the detection of large-scale deletions in the 3' end of the PMS2 gene has not been possible due to technical difficulties associated with pseudogene sequences. Here, we utilised a recently described MLPA/long-range PCR-based approach to screen the remaining 22 % (n = 16) of CRC-affected probands for mutations in the 3' end of the PMS2 gene. No deletions encompassing any or all of exons 12 through 15 were identified; therefore, our results suggest that 3' deletions in PMS2 are not a frequent occurrence in such families.
引用
收藏
页码:563 / 566
页数:4
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