Quantification of hepatitis B virus (HBV) DNA with a TaqMan HBV analyte-specific reagent following sample processing with the MagNA pure LC instrument

被引:9
作者
Germer, JJ
Qutub, MO
Mandrekar, JN
Mitchell, PS
Yao, JDC
机构
[1] Mayo Clin Rochester, Div Clin Microbiol, Rochester, MN 55905 USA
[2] Mayo Clin Rochester, Biostat Sect, Rochester, MN 55905 USA
[3] King Faisal Specialist Hosp & Res Ctr, Dept Pathol & Lab Med, Riyadh 11211, Saudi Arabia
关键词
D O I
10.1128/JCM.44.4.1490-1494.2006
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
TaqMan hepatitis B virus (HBV) analyte-specific reagent (ASR; Roche Molecular Systems, Inc., Branchburg, NJ) is designed for the quantification of HBV DNA in serum or plasma. The performance characteristics of TaqMan HBV ASR following automated sample processing with the MagNA Pure LC instrument (MP; Roche Applied Science, Indianapolis, IN) were evaluated in this study. Analytical sensitivity and precision were assessed with commercially available HBV standards, while clinical serum specimens from HBsAg-seropositive patients and healthy blood donors were used to determine clinical sensitivity, specificity, and correlation with other commercially available assays. Analytical studies yielded a limit of detection of 2.4 IU/ml, with good linearity and correlation (R(2) = 0.9958) with expected HBV DNA titers over a wide range (6.0 x 10(0) to 2.1 x 10(8) IU/ml). Clinical sensitivity and specificity of the assay combined with automated sample processing were both 100%. Comparison of TaqMan HBV ASR and VERSANT HBV DNA 3.0 assay (bDNA; Bayer HealthCare LLC, Tarrytown, NY) results among clinical specimens yielded good correlation (R(2) = 0.9237), with a mean difference in titer of -0.213 log(10) IU/ml (95% confidence interval, -0.678 to 1.10 log(10) IU/ml). The overall test failure rate was 2.0% among 204 clinical serum specimens tested. Total time required for MP sample processing and automated postelution handling of 24 samples was 224 min, with 57 min of actual hands-on time. MP is a reliable, labor-saving platform suitable for use with TaqMan HBV ASR, providing sensitive and accurate quantification of HBV DNA levels over a range of 8 log(10) IU/ml.
引用
收藏
页码:1490 / 1494
页数:5
相关论文
共 20 条
[1]   Performance characteristics of a quantitative TaqMan hepatitis C virus RNA analyte-specific reagent [J].
Barbeau, JM ;
Goforth, J ;
Caliendo, AM ;
Nolte, FS .
JOURNAL OF CLINICAL MICROBIOLOGY, 2004, 42 (08) :3739-3746
[2]  
BEASLEY RP, 1988, CANCER, V61, P1942, DOI 10.1002/1097-0142(19880515)61:10<1942::AID-CNCR2820611003>3.0.CO
[3]  
2-J
[4]   STATISTICAL METHODS FOR ASSESSING AGREEMENT BETWEEN TWO METHODS OF CLINICAL MEASUREMENT [J].
BLAND, JM ;
ALTMAN, DG .
LANCET, 1986, 1 (8476) :307-310
[5]   RAPID PURIFICATION OF HEPATITIS-B VIRUS-DNA FROM SERUM [J].
BOOM, R ;
SOL, CJA ;
HEIJTINK, R ;
WERTHEIMVANDILLEN, PME ;
VANDERNOORDAA, J .
JOURNAL OF CLINICAL MICROBIOLOGY, 1991, 29 (09) :1804-1811
[6]  
Finney D.J., 1977, PROBIT ANAL, VIII
[7]   Evaluation of the COBAS TaqMan HCV Test with automated sample processing using the MagNA pure LC instrument [J].
Germer, JJ ;
Harmsen, WS ;
Mandrekar, JN ;
Mitchell, PS ;
Yao, JDC .
JOURNAL OF CLINICAL MICROBIOLOGY, 2005, 43 (01) :293-298
[8]   Medical progress - Hepatitis B virus infection [J].
Lee, WM .
NEW ENGLAND JOURNAL OF MEDICINE, 1997, 337 (24) :1733-1745
[9]   Management of hepatitis B: 2000 - Summary of a workshop [J].
Lok, AS ;
Heathcote, EJ ;
Hoofnagle, JH .
GASTROENTEROLOGY, 2001, 120 (07) :1828-1853
[10]   Serum hepatitis B virus DNA levels and liver histology in inactive HBsAg carriers [J].
Martinot-Peignoux, M ;
Boyer, N ;
Colombat, M ;
Akremi, R ;
Pham, BN ;
Ollivier, S ;
Castelnau, C ;
Valla, D ;
Degott, C ;
Marcellin, P .
JOURNAL OF HEPATOLOGY, 2002, 36 (04) :543-546