Radiation dose reduction and image enhancement in biological imaging through equally-sloped tomography

被引:63
作者
Lee, Edwin [1 ]
Fahimian, Benjamin P. [1 ,2 ]
Iancu, Cristina V. [3 ]
Suloway, Christian [3 ]
Murphy, Gavin E. [3 ]
Wright, Elizabeth R. [3 ]
Castano-Diez, Daniel [4 ]
Jensen, Grant J. [3 ]
Miao, Jianwei [1 ]
机构
[1] Univ Calif Los Angeles, Dept Phys & Astron, Los Angeles, CA 90095 USA
[2] Univ Calif Los Angeles, Biomed Phys Interdept Grad Program, Los Angeles, CA 90095 USA
[3] CALTECH, Div Biol, Pasadena, CA 91125 USA
[4] European Mol Biol Lab, D-69117 Heidelberg, Germany
基金
美国国家科学基金会;
关键词
Equally-sloped tomography; Electron cryomicroscopy; Iterative reconstruction algorithm; Radiation dose reduction; Image enhancement; Computed tomography;
D O I
10.1016/j.jsb.2008.07.011
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Electron tomography is currently the highest resolution imaging modality available to study the 3D structures of pleomorphic macromolecular assemblies, viruses, organelles and cells. Unfortunately, the resolution is currently limited to 3-5 nm by several factors including the dose tolerance of biological specimens and the inaccessibility of certain tilt angles. Here we report the first experimental demonstration of equally-sloped tomography (EST) to alleviate these problems. As a proof of principle, we applied EST to reconstructing frozen-hydrated keyhole limpet hemocyanin molecules from a tilt-series taken with constant slope increments. In comparison with weighted back-projection (WBP), the algebraic reconstruction technique (ART) and the simultaneous algebraic reconstruction technique (SART), EST reconstructions exhibited higher contrast, less peripheral noise, more easily detectable molecular boundaries and reduced missing wedge effects. More importantly, EST reconstructions including only two-thirds the original images appeared to have the same resolution as full WBP reconstructions, suggesting that EST can either reduce the dose required to reach a given resolution or allow higher resolutions to be achieved with a given dose. EST was also applied to reconstructing a frozen-hydrated bacterial cell from a tilt-series taken with constant angular increments. The results confirmed similar benefits when standard tilts are utilized. (C) 2008 Elsevier Inc. All rights reserved.
引用
收藏
页码:221 / 227
页数:7
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