A novel specific DNA marker in Saccharomyces bayanus for species identification of the Saccharomyces sensu stilcto complex
被引:6
作者:
Huang, Chien-Hsun
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机构:
Food Ind Res & Dev Inst, Bioresource Collect & Res Ctr, Hsinchu 30099, TaiwanFood Ind Res & Dev Inst, Bioresource Collect & Res Ctr, Hsinchu 30099, Taiwan
Huang, Chien-Hsun
[1
]
Lee, Fwu-Ling
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机构:
Food Ind Res & Dev Inst, Bioresource Collect & Res Ctr, Hsinchu 30099, TaiwanFood Ind Res & Dev Inst, Bioresource Collect & Res Ctr, Hsinchu 30099, Taiwan
Lee, Fwu-Ling
[1
]
Tai, Chun-Ju
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机构:
Food Ind Res & Dev Inst, Bioresource Collect & Res Ctr, Hsinchu 30099, TaiwanFood Ind Res & Dev Inst, Bioresource Collect & Res Ctr, Hsinchu 30099, Taiwan
Tai, Chun-Ju
[1
]
机构:
[1] Food Ind Res & Dev Inst, Bioresource Collect & Res Ctr, Hsinchu 30099, Taiwan
DNA fingerprinting;
Novel DNA sequence;
Soccharomyces bayanus;
Saccharomyces sensu stricto complex;
Species identification;
D O I:
10.1016/j.mimet.2008.08.005
中图分类号:
Q5 [生物化学];
学科分类号:
071010 ;
081704 ;
摘要:
This study was based on RAPD fingerprinting for species identification of the Saccharomyces sensu stricto complex. 40 random primers were used for RAPD analysis. The results showed that one of these primers, OPT-18, produced a 974 bp species-specific band, which was only found in the tested S. bayanus. Afterward this specific fragment was isolated from agarose gel and ligated into vector for DNA sequencing. A pair of primer SpeOPT18Sbay-F2 and SpeOPT18Sbay-R2 were designed according to the cloned species-specific sequence, which was employed for PCR with the template DNA of the S. sensu stricto strains, single 779 bp species-specific band was only found in S. bayanus. Therefore, we conclude that our novel species DNA marker could be used to rapidly and accurately identify the species of S. bayanus from S. sensu stricto complex by direct PCR. (C) 2008 Elsevier B.V. All rights reserved.
机构:
KRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Chungnam Natl Univ, Dept Biol, Taejon 306764, South KoreaKRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Chang, Ho-Won
;
Nam, Young-Do
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机构:
KRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Univ Sci & Technol, Taejon 305333, South KoreaKRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Nam, Young-Do
;
Sung, Youlboong
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机构:
KRIBB, Biol Resources Ctr, Taejon 305764, South KoreaKRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Sung, Youlboong
;
Kim, Kyoung-Ho
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机构:
KRIBB, Biol Resources Ctr, Taejon 305764, South KoreaKRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Kim, Kyoung-Ho
;
Roh, Seong Woon
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h-index: 0
机构:
KRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Univ Sci & Technol, Taejon 305333, South KoreaKRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Roh, Seong Woon
;
Yoon, Jung-Hoon
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机构:
KRIBB, Lab Microbail Funct, Taejon 305764, South KoreaKRIBB, Biol Resources Ctr, Taejon 305764, South Korea
机构:
USDA ARS, Natl Ctr Agr Utilizat Res, Microbiol Genom & Bioproc Res Unit, Peoria, IL 61604 USAUSDA ARS, Natl Ctr Agr Utilizat Res, Microbiol Genom & Bioproc Res Unit, Peoria, IL 61604 USA
Kurtzman, CP
;
Robnett, CJ
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机构:
USDA ARS, Natl Ctr Agr Utilizat Res, Microbiol Genom & Bioproc Res Unit, Peoria, IL 61604 USAUSDA ARS, Natl Ctr Agr Utilizat Res, Microbiol Genom & Bioproc Res Unit, Peoria, IL 61604 USA
机构:
KRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Chungnam Natl Univ, Dept Biol, Taejon 306764, South KoreaKRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Chang, Ho-Won
;
Nam, Young-Do
论文数: 0引用数: 0
h-index: 0
机构:
KRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Univ Sci & Technol, Taejon 305333, South KoreaKRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Nam, Young-Do
;
Sung, Youlboong
论文数: 0引用数: 0
h-index: 0
机构:
KRIBB, Biol Resources Ctr, Taejon 305764, South KoreaKRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Sung, Youlboong
;
Kim, Kyoung-Ho
论文数: 0引用数: 0
h-index: 0
机构:
KRIBB, Biol Resources Ctr, Taejon 305764, South KoreaKRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Kim, Kyoung-Ho
;
Roh, Seong Woon
论文数: 0引用数: 0
h-index: 0
机构:
KRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Univ Sci & Technol, Taejon 305333, South KoreaKRIBB, Biol Resources Ctr, Taejon 305764, South Korea
Roh, Seong Woon
;
Yoon, Jung-Hoon
论文数: 0引用数: 0
h-index: 0
机构:
KRIBB, Lab Microbail Funct, Taejon 305764, South KoreaKRIBB, Biol Resources Ctr, Taejon 305764, South Korea
机构:
USDA ARS, Natl Ctr Agr Utilizat Res, Microbiol Genom & Bioproc Res Unit, Peoria, IL 61604 USAUSDA ARS, Natl Ctr Agr Utilizat Res, Microbiol Genom & Bioproc Res Unit, Peoria, IL 61604 USA
Kurtzman, CP
;
Robnett, CJ
论文数: 0引用数: 0
h-index: 0
机构:
USDA ARS, Natl Ctr Agr Utilizat Res, Microbiol Genom & Bioproc Res Unit, Peoria, IL 61604 USAUSDA ARS, Natl Ctr Agr Utilizat Res, Microbiol Genom & Bioproc Res Unit, Peoria, IL 61604 USA