Rapid identification of Gram-negative organisms from blood culture bottles using a modified extraction method and MALDI-TOF mass spectrometry

被引:32
作者
Gray, Timothy J. [1 ]
Thomas, Lee [1 ]
Olma, Tom [1 ]
Iredell, Jonathan R. [1 ,2 ,3 ]
Chen, Sharon C. -A. [1 ,3 ]
机构
[1] Westmead Hosp, Ctr Infect Dis & Microbiol Lab Serv, Inst Clin Pathol & Med Res, Westmead, NSW 2145, Australia
[2] Westmead Hosp, Ctr Res Excellence Crit Infect, Westmead Millennium Inst, Westmead, NSW 2145, Australia
[3] Univ Sydney, Westmead Hosp, Sydney Emerging Infect Dis Inst, Westmead, NSW 2145, Australia
关键词
Gram negative bacilli; Blood culture; Bloodstream infection; MALDI-TOF; Mass-spectrometry; DESORPTION IONIZATION-TIME; BACTERIA;
D O I
10.1016/j.diagmicrobio.2013.06.016
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
The application of matrix-assisted laser desorption/ionisation time-of-flight (MALDI-TOF) mass spectrometry (MS) directly to blood culture broth has potential to identify bloodstream infection earlier and facilitate timely management. We prospectively tested a novel, rapid, and inexpensive in-house spin-lysis protocol with formic acid extraction and compared MALDI-TOF MS identification of Gram-negative bacteria with traditional phenotypic methods (Phoenix (TM)) directly from 318 BACTEC (TM) (Becton Dickinson, Franklin Lakes, USA) blood cultures. The MS score was >= 1.7 in 268 (91.8%) monomicrobial broths, with concordance to genus and species level of 100% and 97.0%, respectively. MALDI-TOF MS still has limited capacity to detect all species in polymicrobial broths. Crown Copyright (C) 2013 Published by Elsevier Inc. All rights reserved.
引用
收藏
页码:110 / 112
页数:3
相关论文
共 16 条
[1]   Rapid Identification of Bacteria from Positive Blood Culture Bottles by Use of Matrix-Assisted Laser Desorption-Ionization Time of Flight Mass Spectrometry Fingerprinting [J].
Christner, Martin ;
Rohde, Holger ;
Wolters, Manuel ;
Sobottka, Ingo ;
Wegscheider, Karl ;
Aepfelbacher, Martin .
JOURNAL OF CLINICAL MICROBIOLOGY, 2010, 48 (05) :1584-1591
[2]   Impact of Matrix-Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry on the Clinical Management of Patients With Gram-negative Bacteremia: A Prospective Observational Study [J].
Clerc, Olivier ;
Prod'hom, Guy ;
Vogne, Christelle ;
Bizzini, Alain ;
Calandra, Thierry ;
Greub, Gilbert .
CLINICAL INFECTIOUS DISEASES, 2013, 56 (08) :1101-1107
[3]  
Dekker J., 2011, Clinical Microbiology Newsletter, V33, P87
[4]   Microorganisms direct identification from blood culture by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry [J].
Ferreira, L. ;
Sanchez-Juanes, F. ;
Porras-Guerra, I. ;
Garcia-Garcia, M. I. ;
Garcia-Sanchez, J. E. ;
Gonzalez-Buitrago, J. M. ;
Munoz-Bellido, J. L. .
CLINICAL MICROBIOLOGY AND INFECTION, 2011, 17 (04) :546-551
[5]   Rapid Identification of Bacteria and Yeasts from Positive-Blood-Culture Bottles by Using a Lysis-Filtration Method and Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrum Analysis with the SARAMIS Database [J].
Fothergill, Amy ;
Kasinathan, Vyjayanti ;
Hyman, Jay ;
Walsh, John ;
Drake, Tim ;
Wang, Yun F. .
JOURNAL OF CLINICAL MICROBIOLOGY, 2013, 51 (03) :805-809
[6]   Highly efficient classification and identification of human pathogenic bacteria by MALDI-TOF MS [J].
Hsieh, Sen-Yung ;
Tseng, Chiao-Li ;
Lee, Yun-Shien ;
Kuo, An-Jing ;
Sun, Chien-Feng ;
Lin, Yen-Hsiu ;
Chen, Jen-Kun .
MOLECULAR & CELLULAR PROTEOMICS, 2008, 7 (02) :448-456
[7]   Identification of Bacteria in Blood Culture Broths Using Matrix-Assisted Laser Desorption-Ionization Sepsityper™ and Time of Flight Mass Spectrometry [J].
Kok, Jen ;
Thomas, Lee C. ;
Olma, Thomas ;
Chen, Sharon C. A. ;
Iredell, Jonathan R. .
PLOS ONE, 2011, 6 (08)
[8]   Direct Identification of Bacteria in Positive Blood Culture Bottles by Matrix-Assisted Laser Desorption Ionisation Time-of-Flight Mass Spectrometry [J].
La Scola, Bernard ;
Raoult, Didier .
PLOS ONE, 2009, 4 (11)
[9]   A differential centrifugation protocol and validation criterion for enhancing mass spectrometry (MALDI-TOF) results in microbial identification using blood culture growth bottles [J].
March-Rossello, G. A. ;
Munoz-Moreno, M. F. ;
Garcia-Loygorri-Jordan de Urries, M. C. ;
Bratos-Perez, M. A. .
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES, 2013, 32 (05) :699-704
[10]   Matrix-assisted laser desorption ionization time-of-flight mass spectrometry identifies 90% of bacteria directly from blood culture vials [J].
Moussaoui, W. ;
Jaulhac, B. ;
Hoffmann, A. -M. ;
Kostrzewa, M. ;
Riegel, P. ;
Prevost, G. .
CLINICAL MICROBIOLOGY AND INFECTION, 2010, 16 (11) :1631-1638