Antiviral drug design: Computational analyses of the effects of the L100I mutation for HIV-RT on the binding of NNRTIs

被引:41
作者
Wang, DP [1 ]
Rizzo, RC [1 ]
Tirado-Rives, J [1 ]
Jorgensen, WL [1 ]
机构
[1] Yale Univ, Dept Chem, New Haven, CT 06520 USA
关键词
D O I
10.1016/S0960-894X(01)00510-8
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Monte Carlo/free energy perturbation (MC/FEP) calculations were used to evaluate the binding free energy change for HIV-RT/inhibitor complexes upon L100I mutation. Inhibitor size and flexibility adjacent to hydrogen-bonding sites are evident as important considerations for antiviral drug design. (C) 2001 Elsevier Science Ltd. All rights reserved.
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收藏
页码:2799 / 2802
页数:4
相关论文
共 23 条
[1]   Synthesis and anti-HIV activity of 1,1,3-trioxo-2H,4H-thieno[3,4-e][1,2,4]thiadiazines (TTDs):: A new family of HIV-1 specific non-nucleoside reverse transcriptase inhibitors [J].
Arranz, ME ;
Díaz, JA ;
Ingate, ST ;
Witvrouw, M ;
Pannecouque, C ;
Balzarini, J ;
De Clercq, E ;
Vega, S .
BIOORGANIC & MEDICINAL CHEMISTRY, 1999, 7 (12) :2811-2822
[2]   RESISTANCE PATTERN OF HUMAN-IMMUNODEFICIENCY-VIRUS TYPE-1 REVERSE-TRANSCRIPTASE TO QUINOXALINE S-2720 [J].
BALZARINI, J ;
KARLSSON, A ;
MEICHSNER, C ;
PAESSENS, A ;
RIESS, G ;
DECLERCQ, E ;
KLEIM, JP .
JOURNAL OF VIROLOGY, 1994, 68 (12) :7986-7992
[3]   Unique anti-human immunodeficiency virus activities of the nonnucleoside reverse transcriptase inhibitors calanolide A, costatolide, and dihydrocostatolide [J].
Buckheit, RW ;
White, EL ;
Fliakas-Boltz, V ;
Russell, J ;
Stup, TL ;
Kinjerski, TL ;
Osterling, MC ;
Weigand, A ;
Bader, JP .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 1999, 43 (08) :1827-1834
[4]   Highly potent oxathiin carboxanilide derivatives with efficacy against nonnucleoside reverse transcriptase inhibitor-resistant human immunodeficiency virus isolates [J].
Buckheit, RW ;
Snow, MJ ;
FliakasBoltz, V ;
Kinjerski, TL ;
Russell, JD ;
Pallansch, LA ;
Brouwer, WG ;
Yang, SS .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 1997, 41 (04) :831-837
[5]  
CHENG Y, 1973, BIOCHEM PHARMACOL, V22, P3099
[6]   Perspectives of non-nucleoside reverse transcriptase inhibitors (NNRTIs) in the therapy of HIV-1 infection [J].
De Clercq, E .
FARMACO, 1999, 54 (1-2) :26-45
[7]   The role of non-nucleoside reverse transcriptase inhibitors (NNRTIs) in the therapy of HIV-1 infection [J].
De Clercq, E .
ANTIVIRAL RESEARCH, 1998, 38 (03) :153-179
[8]  
DECLERCQ E, 1994, BIOCHEM PHARMACOL, V47, P55
[9]   Development and testing of the OPLS all-atom force field on conformational energetics and properties of organic liquids [J].
Jorgensen, WL ;
Maxwell, DS ;
TiradoRives, J .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1996, 118 (45) :11225-11236
[10]   COMPARISON OF SIMPLE POTENTIAL FUNCTIONS FOR SIMULATING LIQUID WATER [J].
JORGENSEN, WL ;
CHANDRASEKHAR, J ;
MADURA, JD ;
IMPEY, RW ;
KLEIN, ML .
JOURNAL OF CHEMICAL PHYSICS, 1983, 79 (02) :926-935