Chloroplast DNA variation in European white oaks -: Phylogeography and patterns of diversity based on data from over 2600 populations

被引:552
作者
Petit, RJ
Csaikl, UM
Bordács, S
Burg, K
Coart, E
Cottrell, J
van Dam, B
Deans, JD
Dumolin-Lapègue, S
Fineschi, S
Finkeldey, R
Gillies, A
Glaz, I
Goicoechea, PG
Jensen, JS
König, AO
Lowe, AJ
Madsen, SF
Mátyás, G
Munro, RC
Olalde, M
Pemonge, MH
Popescu, F
Slade, D
Tabbener, H
Taurchini, D
de Vries, SGM
Ziegenhagen, B
Kremer, A
机构
[1] INRA, Stn Rech Forestieres, F-33611 Gazinet, France
[2] Austrian Res Ctr Seibersdorf, A-2444 Seibersdorf, Austria
[3] NIAQC, Dept Forestry, H-1024 Budapest, Hungary
[4] CLO, Dept Platn Genet & Breeding, B-9090 Melle, Belgium
[5] Forestry Commiss Roslin, No Res Stn, Roslin EH25 9SY, Midlothian, Scotland
[6] ALTERRA, Green World Res, NL-6700 AA Wageningen, Netherlands
[7] Inst Terr Ecol, Penicuik EH26 0QB, Midlothian, Scotland
[8] CNR, Ist Agroselvicoltura, I-05010 Porano, TR, Italy
[9] WSL, Birmensdorf, Switzerland
[10] Forestry Res Inst Warsaw, Dept Genet & Physiol Woody Plants, PL-00973 Warsaw, Poland
[11] NEIKER AB, Granja Modelo Arkaute, Vitoria 01080, Spain
[12] Horsholm Kongevej, DFLRI, DK-2970 Horsholm, Denmark
[13] Inst Forstgenet & Forstpflanzenzuchtung, Bundesforschungsanstalt Forst & Holzwirtschaft, D-22927 Grosshansdorf, Germany
[14] Royal Vet & Agr Univ, Arboretum, DK-3970 Horsholm, Denmark
[15] Arboretum Simeria, ICAS, Simeria, Romania
[16] Forest Res Inst, Jastrebarsko 10450, Croatia
关键词
admixture; genetic diversity; genetic differentiation; introgression; phlogeny; phylogeography; refugia;
D O I
10.1016/S0378-1127(01)00645-4
中图分类号
S7 [林业];
学科分类号
0829 ; 0907 ;
摘要
A consortium of 16 laboratories have studied chloroplast DNA (cpDNA) variation in European white oaks. A common strategy for molecular screening, based on restriction analysis of four PCR-amplified cpDNA fragments, was used to allow comparison among the different laboratories. A total of 2613 oak populations (12,214 individual trees from eight species) were sampled from 37 countries, and analysed with the four fragments, They belong to eight related oak species: Quercus robur. Q. petraea, Q. pubescens, Q. frainetto, Q. faginea, Q. pyrenaica, Q. canariensis and Q, macranthera. During this,survey. 45 chloroplast variants were detected and are described together with their phylogenetic relationships, but several of these haplotypes were pooled when there were some risks of confusion across laboratories during the survey, and finally 32 remained that were mapped and used in diversity analyses. A strong phylogeographic structure is apparent from the data, where related haplotypes have broadly similar geographic distributions, In total, six cpDNA lineages are identified, which have distinct geographic distributions, mainly along a longitudinal gradient. Most haplotypes found in northern Europe are also present in the south, whereas the converse is not true, suggesting that the majority of mutations observed were generated prior to postglacial recolonisation, corroborating the conclusions of earlier studies. The description of a new western European lineage constitutes a major finding, compared to earlier phylogenetic treatments. Although the eight oak, species studied systematically share cpDNA variants when in sympatry, they partition cpDNA diversity differently, as a consequence of their different ecology and life history attributes. Regional differences in levels of differentiation also exist (either species-specific or general): these seem to be related to the intensity of past and present management of the forests across Europe but also to the level of fragmentation of the range within these regions. (C) 2002 Elsevier Science B.V. All rights reserved.
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页码:5 / 26
页数:22
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