Cloning and assembly strategies in microbial genome projects

被引:33
作者
Frangeul, L
Nelson, KE
Buchrieser, C
Danchin, A
Glaser, P
Kunst, F
机构
[1] Inst Pasteur, Lab Genom Microorganismes Pathogenes, F-75724 Paris 15, France
[2] Inst Genom Res, Rockville, MD 20850 USA
[3] Inst Pasteur, Unite Regulat Express Genet, F-75724 Paris 15, France
来源
MICROBIOLOGY-SGM | 1999年 / 145卷
关键词
genome sequencing; microbial genomes; cloning strategies; shotgun; bioinformatics;
D O I
10.1099/00221287-145-10-2625
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
[No abstract available]
引用
收藏
页码:2625 / 2634
页数:10
相关论文
共 72 条
[1]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[2]   The genome sequence of Rickettsia prowazekii and the origin of mitochondria [J].
Andersson, SGE ;
Zomorodipour, A ;
Andersson, JO ;
Sicheritz-Pontén, T ;
Alsmark, UCM ;
Podowski, RM ;
Näslund, AK ;
Eriksson, AS ;
Winkler, HH ;
Kurland, CG .
NATURE, 1998, 396 (6707) :133-140
[3]   A genome-based approach for the identification of essential bacterial genes [J].
Arigoni, F ;
Talabot, F ;
Peitsch, M ;
Edgerton, MD ;
Meldrum, E ;
Allet, E ;
Fish, R ;
Jamotte, T ;
Curchod, ML ;
Loferer, H .
NATURE BIOTECHNOLOGY, 1998, 16 (09) :851-856
[4]   AN ORDERED COLLECTION OF BACILLUS-SUBTILIS DNA SEGMENTS CLONED IN YEAST ARTIFICIAL CHROMOSOMES [J].
AZEVEDO, V ;
ALVAREZ, E ;
ZUMSTEIN, E ;
DAMIANI, G ;
SGARAMELLA, V ;
EHRLICH, SD ;
SERROR, P .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (13) :6047-6051
[5]   PCR AMPLIFICATION OF UP TO 35-KB DNA WITH HIGH-FIDELITY AND HIGH-YIELD FROM LAMBDA-BACTERIOPHAGE TEMPLATES [J].
BARNES, WM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (06) :2216-2220
[6]   NUCLEOTIDE-SEQUENCE OF THE GENE OMPA CODING THE OUTER-MEMBRANE PROTEIN-II-STAR OF ESCHERICHIA-COLI-K-12 [J].
BECK, E ;
BREMER, E .
NUCLEIC ACIDS RESEARCH, 1980, 8 (13) :3011-3027
[7]   CLONING, SEQUENCING, AND CHARACTERIZATION OF THE GENE ENCODING FRPB, A MAJOR IRON-REGULATED, OUTER-MEMBRANE PROTEIN OF NEISSERIA-GONORRHOEAE [J].
BEUCHER, M ;
SPARLING, PF .
JOURNAL OF BACTERIOLOGY, 1995, 177 (08) :2041-2049
[8]   The complete genome sequence of Escherichia coli K-12 [J].
Blattner, FR ;
Plunkett, G ;
Bloch, CA ;
Perna, NT ;
Burland, V ;
Riley, M ;
ColladoVides, J ;
Glasner, JD ;
Rode, CK ;
Mayhew, GF ;
Gregor, J ;
Davis, NW ;
Kirkpatrick, HA ;
Goeden, MA ;
Rose, DJ ;
Mau, B ;
Shao, Y .
SCIENCE, 1997, 277 (5331) :1453-+
[9]  
BODENTEICH A, 1994, AUTOMATED DNA SEQUEN
[10]   Mapping of the 150 kb spoIIIC-pheA region of the Bacillus subtilis chromosome using Long Accurate PCR and three yeast artificial chromosomes [J].
Bolotin, A ;
Sorokin, A ;
Ehrlich, SD .
MICROBIOLOGY-UK, 1996, 142 :3017-3020