Benchmark database of accurate (MP2 and CCSD(T) complete basis set limit) interaction energies of small model complexes, DNA base pairs, and amino acid pairs

被引:1615
作者
Jurecka, P
Sponer, J
Cerny, J
Hobza, P
机构
[1] Acad Sci Czech Republ, Inst Organ Chem & Biochem, Prague 16610 6, Czech Republic
[2] Ctr Biomol & Complex Mol Syst, Prague 16610 6, Czech Republic
[3] Acad Sci Czech Republ, Inst Biophys, Brno 61265, Czech Republic
关键词
D O I
10.1039/b600027d
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
MP2 and CCSD(T) complete basis set (CBS) limit interaction energies and geometries for more than 100 DNA base pairs, amino acid pairs and model complexes are for the first time presented together. Extrapolation to the CBS limit is done by using two-point extrapolation methods and different basis sets (aug-cc-pVDZ-aug-cc-pVTZ, aug-cc-pVTZ-aug-cc-pVQZ, cc-pVTZ-ccp-VQZ) are utilized. The CCSD(T) correction term, determined as a difference between CCSD( T) and MP2 interaction energies, is evaluated with smaller basis sets (6-31G** and cc-pVDZ). Two sets of complex geometries were used, optimized or experimental ones. The JSCH-2005 benchmark set, which is now available to the chemical community, can be used for testing lower-level computational methods. For the first screening the smaller training set (S22) containing 22 model complexes can be recommended. In this case larger basis sets were used for extrapolation to the CBS limit and also CCSD(T) and counterpoise-corrected MP2 optimized geometries were sometimes adopted.
引用
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页码:1985 / 1993
页数:9
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