An approximation of loop free energy values of RNA H-pseudoknots

被引：53

作者：

Gultyaev, AP

Van Batenburg, FHD

Pleij, CWA

机构：

[1] Leiden Univ, Inst Evolut & Ecol Sci, Sect Theoret Biol & Phylogenet, NL-2311 GP Leiden, Netherlands

[2] Leiden Univ, Gorlaeus Labs, Leiden Inst Chem, NL-2300 RA Leiden, Netherlands

来源：

RNA | 1999年 / 5卷 / 05期

关键词：

helix-coil transitions; pseudoknot loops; RNA structure; RNA thermodynamics;

D O I：

10.1017/S135583829998189X

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

A set of free energy values is suggested for RNA H-pseudoknot loops, The parameters are adjusted to be consistent with the theory of polymer thermodynamics and known data on pseudoknots. The values can be used for estimates of pseudoknot stabilities acid computer predictions of RNA structures.

引用

收藏

页码：609 / 617

页数：9

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